KEGG   Pseudomonas amygdali: BKM19_016170
Entry
BKM19_016170      CDS       T05354                                 
Name
(GenBank) RNA polymerase subunit sigma
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
pamg  Pseudomonas amygdali
Pathway
pamg02020  Two-component system
Brite
KEGG Orthology (KO) [BR:pamg00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    BKM19_016170
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pamg03021]
    BKM19_016170
Transcription machinery [BR:pamg03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     BKM19_016170
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_r4 Sigma70_ECF HTH_23 HTH_28 GerE HTH_65 HTH_24
Other DBs
NCBI-ProteinID: AVB14942
UniProt: A0A0N0XEY4
LinkDB
Position
3285422..3285967
AA seq 181 aa
MTCSSAPDQTRIDDLYAQHSGWLRQWLTRRFGNSFNTADVADLTHDTFLRLLLKPRVFRL
PGEARSFLCTVARGLCIDQWRRGQIEQAWLTELANRPENLHPSPEYVAILLETLHEIDAM
LRDLPHKARTAFLLAQLSGNTYREIAEQIGTSERMVKKYMAQVMYQCMVRELSARADECR
P
NT seq 546 nt   +upstreamnt  +downstreamnt
atgacctgctcaagcgctcctgatcagacccgcatcgacgacctttatgcacagcactcc
ggctggctacgtcagtggctgacccggcgctttggcaactcgttcaacactgccgacgta
gcggacctgactcacgataccttcctgcgcctgttgctcaagcctcgagtattcaggctg
cccggtgaagcgcggtcgttcctatgtaccgttgcacgcggcctgtgcatagatcaatgg
cgtcgtgggcagatagagcaggcatggctgacagagctggcaaaccgccccgagaacctg
cacccctcccccgagtacgttgccattcttctcgagacactgcatgaaatcgacgccatg
ctgcgtgacttgccgcacaaggcgcgaaccgcctttttgctggcgcaactgtcaggcaac
acttaccgcgagattgccgaacagattggcaccagcgagcgcatggtgaaaaagtacatg
gcacaggtcatgtatcagtgcatggtgcgtgaactgtccgcacgtgccgatgagtgtcga
ccatga

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