Pseudomonas amygdali: BKM19_017970
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Entry
BKM19_017970 CDS
T05354
Name
(GenBank) nucleoid-structuring protein H-NS
KO
K01666
4-hydroxy 2-oxovalerate aldolase [EC:
4.1.3.39
]
Organism
pamg
Pseudomonas amygdali
Pathway
pamg00360
Phenylalanine metabolism
pamg00362
Benzoate degradation
pamg00622
Xylene degradation
pamg01100
Metabolic pathways
pamg01120
Microbial metabolism in diverse environments
pamg01220
Degradation of aromatic compounds
Brite
KEGG Orthology (KO) [BR:
pamg00001
]
09100 Metabolism
09105 Amino acid metabolism
00360 Phenylalanine metabolism
BKM19_017970
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
BKM19_017970
00622 Xylene degradation
BKM19_017970
00621 Dioxin degradation
BKM19_017970
Enzymes [BR:
pamg01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.39 4-hydroxy-2-oxovalerate aldolase
BKM19_017970
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Paralog
Gene cluster
GFIT
Motif
Pfam:
HMGL-like
Motif
Other DBs
NCBI-ProteinID:
AVB15248
UniProt:
A0AB35R655
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Position
complement(3644809..3645837)
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AA seq
342 aa
AA seq
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MADIKILDVTLRDGGYRNNFNFTEDQARAITSGLADAGVDLCEIGYCKGSFAPKGEHGLT
SDVGARFIENIAQAAAGRIELAVMVHPKNITVDDFAMLKEQGVSMIRVCLRRDQLDEGLA
TLSLARDHGFSVSANVTHVTSQTPGTVLDTAARAEGAGADIICCADSNGHMLPVDVHRLF
SRLASRLMVPLGFHAHNNLSLALANASAAIEAGAEYIDTSICGMGKGAGNLHLSMLVAYL
ERIGVSHGFDLVKVIELSAVTANSIPHNNMPSPLMDIILGTYNFPYDVSQRVADTLERFQ
LTSEYRAIEVMHQQDKVARLAPRAALSNIFSDLSQSVKGVAL
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atggccgacataaagattctcgacgttacattgcgtgacggtggttatcgaaacaacttc
aacttcacggaagaccaggctcgggctattacttcaggcctggcggatgcaggcgtcgac
ctctgtgaaattggttactgcaagggatcatttgcgccgaagggcgagcacgggctgacc
agtgatgtaggcgcacgctttattgagaacattgcgcaggccgccgctggacgtattgag
ctggcagtgatggttcaccctaaaaacatcacggtagatgacttcgccatgctcaaggag
cagggtgtttcgatgattcgtgtctgtttgcgccgcgatcaactggatgaagggctggcg
accttgtcactggcccgtgatcacggcttcagtgtcagcgccaatgtaacgcatgtgaca
tcgcagacgccgggaaccgtgctcgatacggccgctcgtgcggagggtgccggtgcggac
atcatctgttgtgcggattccaacggtcatatgctgccggtcgatgtgcaccggctgttc
agtcgcctcgcaagccggttgatggtgccactggggtttcacgcccataacaatctgtcg
ctggcgctggcgaatgcatcggcggctatagaggccggtgctgaatacatcgacacgtcc
atctgcggcatgggtaaaggggccgggaatcttcacttgagcatgctggtggcttatctg
gagcgtataggcgtcagccacggttttgacctggtcaaggtgatcgaattgtccgctgtc
acagccaactcgataccgcataacaatatgcccagcccgctgatggatatcattctgggc
acttacaacttcccctacgatgtcagtcagcgggtggcagacacccttgaacggtttcaa
ctgacctccgagtaccgagcgatcgaggtcatgcatcaacaggacaaagtggcgcgcctt
gctccgcgagcggcgttgtcgaatatcttcagtgacctgtcgcaaagcgtaaaaggagtt
gcgctatga
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