Pseudomonas amygdali: BKM19_018685
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Entry
BKM19_018685 CDS
T05354
Symbol
clpA
Name
(GenBank) ATP-dependent Clp protease ATP-binding subunit ClpA
KO
K03694
ATP-dependent Clp protease ATP-binding subunit ClpA
Organism
pamg
Pseudomonas amygdali
Brite
KEGG Orthology (KO) [BR:
pamg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
pamg03110
]
BKM19_018685 (clpA)
Chaperones and folding catalysts [BR:
pamg03110
]
Heat shock proteins
HSP100
BKM19_018685 (clpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA
AAA_lid_9
ClpB_D2-small
AAA_5
Clp_N
AAA_16
AAA_22
Sigma54_activat
RuvB_N
TniB
AAA_14
AAA_18
AAA_7
Mg_chelatase
TsaE
AAA_3
nSTAND3
AAA_6
ATPase_2
RNA_helicase
NACHT
IstB_IS21
Zeta_toxin
TIP49
AAA_33
bpMoxR
Rad17
AAA_28
Torsin
AAA_17
IPT
CobT_C
DUF815
SKI
Motif
Other DBs
NCBI-ProteinID:
AVB15364
UniProt:
A0A0N1JQY1
LinkDB
All DBs
Position
complement(3816201..3818474)
Genome browser
AA seq
757 aa
AA seq
DB search
MLNRELEVTLNLAFKEARSKRHEFMTVEHLLLALLDNEAAATVLRACGANLDKLKHDLQE
FIDSTTPLIPVHDEDRETQPTLGFQRVLQRAVFHVQSSGKREVTGANVLVAIFSEQESQA
VFLLKQQSVARIDVVNYIAHGISKVPGHGEHSSEGEQDMQDDEGGEASSSGNPLDAYASN
LNELARQGRIDPLVGRESEVERVAQILARRRKNNPLLVGEAGVGKTAIAEGLAKRIVDNQ
VPDLLASSVVYSLDLGALLAGTKYRGDFEKRFKALLNELRKRPQAILFIDEIHTIIGAGA
ASGGVMDASNLLKPLLSSGEIRCIGSTTFQEFRGIFEKDRALARRFQKVDVSEPSVEDTI
GILRGLKSRFEQHHSIEYSDEALRAAAELASRYINDRHMPDKAIDVIDEAGAYQRLQPVE
QRVKRIDVPQVEDIVAKIARIPPKHVNSSDKELLRNLERDLKLTVFGQDAAIDSLSTAIK
LSRAGLKSPDKPVGSFLFAGPTGVGKTEAARQLAKALGVELIRFDMSEYMERHTVSRLIG
APPGYVGFDQGGLLTEAITRQPHCVLLLDEIEKAHPEVFNLLLQVMDHGTLTDNNGRKAD
FRNVIVIMTTNAGAESAARASIGFTHQDHSSDAMEVIKKSFTPEFRNRLDTIIQFGRLSH
EVIKSVVDKFLTELQAQLEDKRVLLEVSEAARSWLAQGGYDAAMGARPMARLIQDKIKRP
LAEEILFGELSEHGGVVHIDIKDGEITFDFETTAEMA
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atgttaaaccgtgagctcgaagtcaccctcaatcttgccttcaaggaggcacgttcgaag
cgtcatgagttcatgacggtcgagcacctcctgctggctctattggataatgaggctgca
gccactgttctgcgtgcctgcggtgcaaacctcgataaactcaagcatgatctgcaggag
ttcatcgactccaccactccgctgatccccgttcatgacgaggatcgcgagacgcaaccg
acgctcgggttccagcgtgtgctgcaacgggcagttttccacgtgcagagctccggcaag
cgcgaagtaaccggcgccaacgtgctggttgcaattttcagtgagcaggaaagccaggcc
gtgtttctgctcaagcagcagagcgtggcccggattgatgtcgtcaactatatcgcccac
ggtatctccaaggttccggggcatggcgaacactcttctgaaggtgaacaggatatgcag
gacgacgagggcggtgaagcatcttcctcaggcaatcctctggatgcctatgccagcaat
ctgaacgaattggcgcgccaggggcgcatcgatccgctggtcggtcgcgaaagcgaagtc
gagcgcgtagctcagattctggctcgtcgtcgcaagaacaacccgttgctggtcggtgag
gctggggtcggtaaaacggctattgccgaaggcctggccaagcgtatcgtggacaaccag
gtccctgatttgctcgccagcagcgttgtctactcgcttgatctgggtgccctgctggcc
gggaccaaataccgcggcgatttcgagaagcgtttcaaagcgttgctcaatgagctgcgc
aagcgtcctcaggctattctgttcattgacgagatccacactatcattggtgctggtgcg
gcatcaggcggggtgatggatgcctccaacctgctcaaaccgttgctgtcgtctggcgag
attcgttgcatcggctccacgacctttcaggagtttcgcgggattttcgaaaaagaccgc
gccttggcgcgtcgcttccagaaagtcgatgtgtccgagccttcggtcgaagacaccatc
ggcatccttcgtggcctgaaaagccgtttcgagcagcatcacagcatcgagtacagtgac
gaagcgctgcgcgccgcagctgagcttgcgtcgcgttacatcaatgaccgtcatatgccc
gacaaggcgatcgatgttattgatgaagccggtgcctaccagcgtctgcagcctgtcgag
cagcgcgtcaagcgcattgatgtgcctcaggtcgaagacatcgtcgccaagatcgcgcgt
attccgccaaaacacgtcaacagttcggacaaggagctgctgcgtaacctggagcgcgat
ctgaagctcaccgtgtttggtcaggatgcagccattgactcgttgtcgacggcgatcaag
ctttcgcgtgcaggcctcaagtcgcctgacaagccggtcggttcgttcctgttcgcaggc
cctaccggtgttggcaagaccgaagccgctcgccagttggccaaggcgttgggtgtcgag
ctgattcgtttcgacatgtccgagtacatggagcggcataccgtttcccgtctgatcggc
gcgcctccgggctacgtcggtttcgatcagggcggtcttttgaccgaagccatcactcgt
caaccgcattgcgtgctgctgctcgatgaaatcgaaaaggctcacccggaagtcttcaac
ctgcttttgcaggtgatggaccacggtacgctgaccgataacaacgggcgcaaggcagat
ttccgcaacgtgatcgtgatcatgaccaccaatgccggggctgagtccgccgcgcgtgct
tcgatcggtttcacgcatcaggaccactcgtctgatgcgatggaagtgatcaagaagagc
ttcacgccggagttccgcaaccgtctggacaccatcattcagtttggccgtctcagccac
gaagtcatcaagagcgtggtcgacaagttccttaccgagcttcaggcccagctggaagac
aagcgcgtactgctcgaagtgtccgaggcggcgagaagctggctggcgcagggtggttac
gatgcggcgatgggtgccagaccgatggctcgcctgattcaggacaagatcaagcggccg
ctggctgaagagatcctgttcggcgaattgtcagagcacggcggtgtggttcacatcgat
atcaaggatggcgagattaccttcgacttcgaaaccacagcagaaatggcctga
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