Pseudomonas amygdali: BKM19_018700
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Entry
BKM19_018700 CDS
T05354
Name
(GenBank) NADP-dependent isocitrate dehydrogenase
KO
K00031
isocitrate dehydrogenase [EC:
1.1.1.42
]
Organism
pamg
Pseudomonas amygdali
Pathway
pamg00020
Citrate cycle (TCA cycle)
pamg00480
Glutathione metabolism
pamg00720
Other carbon fixation pathways
pamg01100
Metabolic pathways
pamg01110
Biosynthesis of secondary metabolites
pamg01120
Microbial metabolism in diverse environments
pamg01200
Carbon metabolism
pamg01210
2-Oxocarboxylic acid metabolism
pamg01230
Biosynthesis of amino acids
pamg04146
Peroxisome
Module
pamg_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pamg_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
pamg00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
BKM19_018700
09102 Energy metabolism
00720 Other carbon fixation pathways
BKM19_018700
09106 Metabolism of other amino acids
00480 Glutathione metabolism
BKM19_018700
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
BKM19_018700
Enzymes [BR:
pamg01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.42 isocitrate dehydrogenase (NADP+)
BKM19_018700
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GFIT
Motif
Pfam:
IDH
CAMP_factor
Motif
Other DBs
NCBI-ProteinID:
AVB15366
UniProt:
A0AB35RA94
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Position
3819931..3822162
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AA seq
743 aa
AA seq
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MSNRSKIIYTFTDEAPALATYSLLPIIEAFTASSDIDVETRDISLAGRVLSSFPESLGAD
QQVPDHLAELGKLATTPEANIIKLPNISASVPQLKATIKELQDQGYKIPDYPENPVTDAE
KETRARYDKTKGSAVNPVLREGNSDRRAPLSVKNYARKHPHKMGAWSADSKAHVAHMSNG
DFYGSEKAAQIAADNTVKIELIAQDGTTTVLKEKTAVKAGEVVDCSVMSAKALRSFIAAE
IEDARKQGVLFSVHLKATMMKISDPIMFGQIVDEFYKDALTKHADTLKQIGFSLNNGIGD
LYERITSLPAEKQAEIKADIEAVYATRPQLAMVNSDKGITNLHVPSDVIVDASMPAMIRD
SGKMWGTDGQLHDAKAVIPDRCYATIYQAVIEDCKKNGAFDPTTMGSVPNVGLMAQKAEE
YGSHDKTFHIQTNGVVRVTDSQGNLLMEQNVEAGDIWRMCQAKDAPIQDWVKLAVNRARA
SNTPTIFWLDSSRAHDSVMIEKVRKYLGDHDTSGLDIQILSPVDAMKLTLERTRAGKDTI
SVTGNVLRDYLTDLFPIMELGTSAKMLSIVPLMNGGGLFETGAGGSAPKHVQQFVEENFL
RWDSLGEFLALAASLEHLGNAYNNPKALVLSKTLDQATGEFLDRNKSPSRKVGGIDNRGS
HFYLTLFWAQALAAQNDDADLKAQFTPLAKTLTDNEEKIVAELNAVQGKPVEIGGYYFPN
PEVTSKAMRPSATLNAAIDALKA
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaccgctcgaagatcatctacaccttcaccgacgaagctccggccctcgccacc
tattcgctgctgcctattatcgaagctttcacagcctcctccgatatcgacgtggaaacg
cgcgacatctccctggcgggccgtgttctttcaagcttcccggagtcgcttggcgccgat
caacaagtgccggatcatctcgccgagctgggcaaactggccactacgccagaagccaac
atcatcaagctgcctaacatcagtgcctcggtccctcaattgaaggcgaccatcaaggag
cttcaggatcagggctacaagattcccgactaccctgaaaaccctgtcactgacgcggaa
aaagaaacccgcgcacgctacgacaagaccaagggtagcgccgtgaacccggtgctgcgc
gaaggcaactccgatcgtcgcgcaccgctgtcggtcaagaactacgctcgcaagcaccca
cacaaaatgggcgcctggtccgccgactccaaggcccacgttgcgcacatgagcaacggc
gacttctacggcagcgaaaaagctgcccagatcgcagccgacaacaccgttaaaatcgaa
ctgatcgctcaggacggcaccaccaccgttctgaaggaaaaaaccgccgtcaaggctggc
gaagtcgttgactgctcggtaatgagcgccaaagctctgcgcagcttcattgccgccgag
atcgaagacgcccgcaagcaaggcgttctgttctcggtgcatctgaaagccaccatgatg
aagatctccgacccgatcatgttcggccagatcgttgatgagttctacaaggatgcattg
accaagcacgctgacacgctgaagcagatcggcttcagcctgaacaacggcatcggtgac
ctgtacgagcgcatcaccagcctgcctgctgaaaaacaggccgaaatcaaggctgacatc
gaagcggtctacgccactcgcccacaactggcgatggtcaactccgacaagggcatcacc
aacctgcacgtgccgagcgacgtaattgtcgacgcatcgatgccagcgatgatccgtgac
tccggcaagatgtggggcacagatggtcaactgcacgatgccaaggcagtgatcccggat
cgctgctacgccaccatctatcaagcggtcatcgaagactgcaagaaaaatggcgcattc
gacccgaccactatgggcagcgtaccgaacgttggcctgatggctcaaaaagccgaagaa
tatggctcccacgacaagactttccacatccagaccaacggcgtggttcgtgtaaccgac
agccagggcaacctgctgatggaacagaacgtcgaagcgggcgatatctggcgcatgtgc
caggccaaggacgcgccgatccaggattgggtaaaactggccgtcaaccgcgctcgcgcc
agcaacacaccgactatcttctggctggattcgtctcgcgcccatgacagcgtgatgatc
gagaaagtccgcaagtacctgggcgaccacgacacgtcgggcctggatatccagatcctg
tcacctgtcgacgcgatgaagctgaccctggaacgcactcgcgccggcaaggacacgatc
tcggtaacgggcaacgtgcttcgcgattacctgaccgatctgttcccgatcatggaactg
ggcacaagcgcgaaaatgctgtcgatcgttccgctgatgaacggcggcggtctgttcgaa
accggcgctggcggctcggctcccaagcatgtgcagcagtttgttgaagaaaacttcctg
cgctgggattcgcttggcgagtttctggctctggcggcgtccctggaacatctgggcaat
gcctacaacaacccgaaagcgctggttctgtccaagaccctcgaccaggccactggcgag
ttcctggaccgcaacaagtcgccttcgcgcaaggttggcggcatcgacaaccgcggcagt
cacttctacctgaccctgttctgggctcaggcactggctgctcaaaacgacgatgcagac
ctcaaggcacagttcacgcctttggccaaaaccctgactgacaacgaagaaaaaatcgtt
gccgagctgaacgctgttcagggcaagccggtggaaattggcggctactacttccctaac
ccggaagtcaccagcaaggccatgcgcccaagcgccactctcaacgcagctatcgatgcg
ttgaaagcgtaa
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