Pseudomonas amygdali: BKM19_019340
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Entry
BKM19_019340 CDS
T05354
Name
(GenBank) lipopolysaccharide biosynthesis protein
KO
K20998
polysaccharide biosynthesis protein PslE
Organism
pamg
Pseudomonas amygdali
Pathway
pamg02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pamg00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
BKM19_019340
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Paralog
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Motif
Pfam:
GNVR
Wzz
Bacillus_HBL
MeaB
dCMP_cyt_deam_2
PRR11_2nd
Motif
Other DBs
NCBI-ProteinID:
AVB15480
UniProt:
A0AB35QUD9
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All DBs
Position
3957943..3959934
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AA seq
663 aa
AA seq
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MINIRSFRDLLRLLFIFKREVRITVVATFVIILLGAFLLPNRYESTALLLVKPGRDSSTV
PIELSDRQAIVIPSGLRDPLLDEERMLSGRPIMRAVSEKYLAELSMVPPETGILASVKNG
LKTVVGAVVNGVRNVLQFIGLVEHRSQAERLAEDLEKNFKVSHEPGSSVMELRFTWNDPD
IAQTVLRTWITEYQLQRTKTLGRVSLYAFYESEVKTTGANIIEYKKQIQNYLNQLSAVSI
SQRLADTSQGLNDLRTERNNTTRSIASTKAGLDLLKKQLAEQPKTVSAGRELALNPNRQD
LQNRINGKEVERQEMLRSFKEEAPPIRAINEEVNNLKKLLKEQEATVQRSESITPNPIYN
RMQNVYADQQTSYARLQTQLVQQNAQIAQLESDRQQALNLEPELSRLQNELDAAEKSYAL
YKDSLEKSRIDRELDNSQISNIATIEDATFNPSRVFPKSLLMLFLAFPLSIVVGAVALYF
FYLLDQRIHDGDKIESSFGVPVWTSLPDLERAQERSAAFTSNLHRVYGILPLDQVDERGL
TIGFTSVKSGAGVSFVIERLSTLLIEQGHRVRTEGRGPASPGEIVLINASALSANQDAFV
LLRKADLIVLVVRAEDTTVPMLEDTLNNLNTAFKKVDGIIINRRRFEVPEQVLNFLKRIG
SRG
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgatcaacatccgctcattccgcgacctgctgcgcctgctgttcattttcaagcgcgaa
gtcaggatcaccgtggtggcgaccttcgtcatcatccttctgggcgcgtttctgctcccc
aaccgctacgagtccacggctttgctgttagtcaagcccggccgcgacagcagcactgtg
cctatcgagctgtcagaccgtcaggccatcgtgataccgagcggcctgcgtgatccgctg
ctcgatgaagagcgcatgctcagcggacggccgatcatgcgtgcagtgtccgagaaatac
ctcgccgagctgtctatggtgccgcccgaaaccggcattctggcgtcggtgaagaacggc
ctcaagacagtcgtcggggcagtcgtcaacggcgtgcgcaacgttctgcaatttatcggt
ctggtggagcaccgctcgcaggccgaacgtctggccgaggatctggagaaaaacttcaag
gtcagccacgaaccgggctcgtcggtgatggagctgagatttacctggaacgacccggac
atcgcccagaccgtgctcaggacctggatcaccgagtaccagttgcaacgcacaaagaca
ctgggccgggtcagcctgtacgcgttctatgaatcggaagtgaaaacgaccggcgcgaac
atcatcgagtacaagaagcaaatccagaattacctgaaccagttgagcgcagtgagcatt
tcccagcgcctggcagatacctcgcaggggctcaacgatctgcgtaccgagcgcaacaac
acaacccgttccattgcgtctaccaaggccggcctggacctgctgaaaaagcagttggca
gagcaacccaagacagtctcggcaggtcgcgaactggcgttgaaccccaatcgccaggac
ttgcagaaccgcatcaatggcaaggaagtggagcgtcaggaaatgctccgctcgttcaag
gaagaggcgccgccaatccgggcgatcaatgaggaggtcaacaacctcaaaaagctgctc
aaggaacaggaagccaccgtccagcgctctgaaagcatcactcccaaccccatctacaac
cgcatgcagaacgtgtacgccgatcagcagaccagctacgcgcgcctgcaaacccagctc
gttcagcaaaatgcgcagatcgcgcagctggaaagcgaccgccagcaggcactgaatctg
gagccggagctttcgcgcctgcagaacgaactggatgcggccgagaaaagctatgcgctg
tacaaggacagcctggaaaaatcgcgtattgaccgtgagctggacaacagccagatcagc
aatattgcgaccatcgaagacgccaccttcaaccccagccgggtgttcccgaaaagcctg
ctgatgctgtttctggcattcccgctgagtattgtggtcggtgccgtggcgctgtacttc
ttctacctgctggaccagcgcatccacgacggcgacaagatcgagagcagcttcggcgtt
ccagtctggaccagcctccccgacctggaacgtgctcaggagcgcagtgcagccttcacc
tccaatttgcaccgggtatacggcattttgccgctcgatcaggtagatgagcgcggcctg
accatcggcttcacgtcggtcaagtccggcgcaggcgtgtcgttcgtgatcgagcggctg
agtacattactgatcgaacagggtcatcgggtccgcaccgaaggccgcggcccggccagt
cctggcgaaatcgtgttgatcaacgcttcggcactttccgccaatcaggatgcttttgtg
ctgctacgcaaggctgacctgatcgtgttggtggtgcgtgccgaagacaccaccgtgccg
atgctggaagacaccttgaataacctcaataccgcattcaagaaagtcgacggcatcatt
atcaaccgccgtcgtttcgaggtaccggagcaggtacttaacttcctcaaacggatcggg
agccgaggctga
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