Pseudomonas amygdali: BKM19_019435
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Entry
BKM19_019435 CDS
T05354
Name
(GenBank) TetR/AcrR family transcriptional regulator
KO
K19736
TetR/AcrR family transcriptional regulator, regulator of autoinduction and epiphytic fitness
Organism
pamg
Pseudomonas amygdali
Brite
KEGG Orthology (KO) [BR:
pamg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pamg03000
]
BKM19_019435
Transcription factors [BR:
pamg03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
BKM19_019435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TetR_C_7
TetR_N
TetR_C_11
TetR_C_6
TetR_C_24
HTH_22
HTH_11
HTH_36
Motif
Other DBs
NCBI-ProteinID:
AVB15496
UniProt:
A0AB35QTF6
LinkDB
All DBs
Position
3978698..3979312
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AA seq
204 aa
AA seq
DB search
MTAPMRLTDQKRESIVQAAIAEFGDRGFEVTSMDRIAARAEVSKRTVYNHFPSKEELFAE
MLQRLWSCAPPQSEVIYHPNVGLREQLRDLLWGKMRNLTNSNFLDLARVVVGATIHSPER
AQVWMARINEREETFSAWIRAAQKGGRLKPVDPGFAATQMHALLKSFAFWPQVTFNAALL
NPQEQSDVVESALNMFLGWYEVTP
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcacccatgcgcctcaccgatcagaaacgcgaatccatcgtccaggcagctatt
gccgaatttggcgatcgtggtttcgaggtcaccagcatggaccgcatcgctgctcgggcc
gaggtgtccaaacgcacggtctacaaccatttccccagcaaggaagagctgttcgccgag
atgctgcagcgtctgtggagctgtgccccgccgcaatcggaagtgatttatcaccccaat
gtcggtctgcgcgagcaacttcgagacctgctgtggggcaagatgcgcaacctgaccaac
agtaattttctcgacctggcgcgtgtcgtggtgggcgctaccattcactcgcccgagcgt
gctcaagtgtggatggcccgtatcaatgagcgcgaagaaaccttcagcgcgtggatccgg
gcggctcagaaaggcggtcgcctgaagcctgtcgaccccggttttgcggcgacgcagatg
cacgcgttgctcaagtcgttcgcattctggccacaggtaaccttcaatgccgcactgctc
aaccctcaggagcaaagtgatgtggtcgagtcggcgttgaacatgtttctgggctggtac
gaagtgactccctga
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