Pseudomonas amygdali: BKM19_020065
Help
Entry
BKM19_020065 CDS
T05354
Symbol
hemN
Name
(GenBank) oxygen-independent coproporphyrinogen III oxidase
KO
K02495
oxygen-independent coproporphyrinogen III oxidase [EC:
1.3.98.3
]
Organism
pamg
Pseudomonas amygdali
Pathway
pamg00860
Porphyrin metabolism
pamg01100
Metabolic pathways
pamg01110
Biosynthesis of secondary metabolites
pamg01240
Biosynthesis of cofactors
Module
pamg_M00121
Heme biosynthesis, plants and bacteria, glutamate => heme
Brite
KEGG Orthology (KO) [BR:
pamg00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
BKM19_020065 (hemN)
Enzymes [BR:
pamg01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.98 With other, known, physiological acceptors
1.3.98.3 coproporphyrinogen dehydrogenase
BKM19_020065 (hemN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
HemN_C
Nudix_N
Imm49
Motif
Other DBs
NCBI-ProteinID:
AVB15613
UniProt:
A0AB35QUI7
LinkDB
All DBs
Position
4107456..4108838
Genome browser
AA seq
460 aa
AA seq
DB search
MLDAIRWDSDLIHRYDVAGPRYTSYPTAVQLHTQIGAFELLHALRESRKALRPLSLYVHL
PFCANICYYCACNKVITKDRGRAQAYLQRLEHEIQMLACHLAPGQVVEQLHLGGGTPTFL
SHAELRRLMAQLRAHFNLLEDDSGDYGIEIDPREADWSTMGLLRELGFNRVSLGVQDLDP
TVQRAINRMQSLEETRAIVEAARTLQFRSVNIDLIYGLPRQTAQAFSRTVDEIIELQPDR
LSVFNYAHLPERFMPQRRIDTAELPDARSKLLMLERTVEQLGNAGYRYIGMDHFALPDDE
LAIAQEDLTLQRNFQGYTTHGHCDLIGLGVSAISQIGELYSQNSSDLSDYQRLLDSDQPA
TRRGLMCSDDDRIRRAVIQQLICHFMLDFAEIEKAFSIDFRDYFSDAWPQLLGMAEDGLI
ALSAAGIEVKPSGRLLVRAVCMVFDAYLTRQNRQQFSRVI
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgcttgacgccattcgttgggattcagacctgatccatcgctatgatgtggcaggaccg
cgctatacgtcctatccgacagcagtgcaacttcacacacaaataggcgcatttgaactg
ctgcatgctctgcgggaaagccgcaaggcgttgcgcccgctgtcgctctatgtgcatctg
cccttctgcgcgaacatttgttactactgtgcctgcaataaggtcatcaccaaggaccgc
ggacgcgcccaggcttacctgcagcggctcgaacacgaaatacagatgctcgcctgccac
ctggcacccggtcaggtagtggagcaactgcacctgggcggcggcacgccgaccttcctg
agtcatgctgaactgcgtcggttgatggcgcagctgcgcgcgcatttcaatttgctggaa
gatgactccggcgactatggcatcgagattgaccctcgcgaagcggactggtcgaccatg
ggcctgctgcgcgagctgggtttcaaccgggtcagccttggcgtgcaggacctggacccg
accgtgcaacgggcgatcaaccgcatgcaaagcctggaggaaacccgcgccatcgtcgaa
gccgcccgcacgctgcagtttcgttctgtgaatatcgacctgatctacggacttcccaga
caaaccgcgcaagccttcagccgcacagtggatgaaatcatcgaattacagcccgaccgg
ttatctgtgttcaactacgcccacctgccggaacgcttcatgccgcagcggcgcatcgac
acggccgaactgccggatgcccggagcaaactgctcatgctcgagcgcaccgtcgagcag
ctgggcaacgccggttatcgctacatcggcatggaccatttcgccctgcccgacgatgag
ctggctatcgcccaggaagacctgaccctgcaacgcaattttcagggctacaccacgcat
ggtcactgtgatctgatcgggctgggcgtctcggccatcagccagattggcgagctgtac
agtcagaacagcagcgacctgagcgactatcaaaggctgctggacagcgaccagccagca
accagacgagggctgatgtgcagcgatgacgaccggataagacgcgcagtcattcagcag
ttgatctgccacttcatgctggatttcgccgagattgaaaaagcattctccatcgatttc
agagactatttcagcgacgcatggccacaactgcttggcatggcggaggacgggctgatt
gcgttgagcgccgcgggaattgaagtgaaaccgtcaggccggttgctggtgcgtgctgtg
tgcatggtcttcgatgcgtacctgacccggcagaacaggcagcagttctcccgggtgata
tga
DBGET
integrated database retrieval system
