Pseudomonas amygdali: BKM19_021580
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Entry
BKM19_021580 CDS
T05354
Name
(GenBank) hybrid sensor histidine kinase/response regulator
KO
K20973
two-component system, sensor histidine kinase SagS [EC:
2.7.13.3
]
Organism
pamg
Pseudomonas amygdali
Pathway
pamg02020
Two-component system
pamg02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pamg00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BKM19_021580
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
BKM19_021580
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pamg01001
]
BKM19_021580
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
pamg02022
]
BKM19_021580
Enzymes [BR:
pamg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
BKM19_021580
Protein kinases [BR:
pamg01001
]
Histidine kinases
Other
BKM19_021580
Two-component system [BR:
pamg02022
]
Other families
SagS-HptB-HsbR (swarming activity and biofilm formation)
BKM19_021580
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HATPase_c
Response_reg
HisKA
PDE8A_N
HATPase_c_2
IFT57
DUF4164
Motif
Other DBs
NCBI-ProteinID:
AVB15858
LinkDB
All DBs
Position
4415994..4418342
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AA seq
782 aa
AA seq
DB search
MDISLKNRLSFKQARLAVLIGFALGTLLSLFQIAIDYASEDASINREIKSLLEIIQNPAS
RIAYNIDSELAQELTLGLLRSPAVVSARLTDNNDAVLASVERPMATGRYRVFSDWLFGES
RQFQEKLHLNHLPDETIGTLYLTVDTFAFGSHFLQRAEITLLNGFVRSLALAGILTILFY
ATLTKPLVRVIRELSSRDPRNPDQGKITCPPHHEQDEIGVLVATFNRQFETMGSEFSRRR
AAEDRLTEHLNELENIVSARTNELKASNIRLRESNEELQIARSTALDMAHARSAFLAHMS
HEIRTPLNGLLGMLALSLDSPLSAEQRQQLMIAHDSGKVLVELLNDILDMSKFDAGHLEI
ERIPFDLGVLIEDTANLLSQNAAPSVELTCLIAPDFPAMVTGDPTRVRQIVSNLLSNALK
FTRFGRVDVRLTHHKDVSGENRVRIEVRDTGIGIAQDAQAKIFQPFTQAETAITRQYGGT
GLGLALTNNLCEAMNGTLSIQSQSGFGSQFCAELPLPVHVSAVTQTALRGRVTVVSSAGS
GLVELLGNLLPTWGVDLKRRSIDDRPEDVDLDSSPDLVITDCPECLFAIRPTTPVPILLV
TAYGNFMPGEQVTALAPLQQQARPLARNALYHTLRRVLGQEETGVRDTKAPEQTAQRMAR
VLLVEDNPVNQLVAKGILGKLGCEVIISSHGGEALEQLEQGHFDLVLMDCNMPVMDGYEA
SRQIRSSGRWPNLPIVALTANAMPDERERCKAAGMNDYLAKPFRRAELAGILDQWIPIAD
IR
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atggatatatcgctcaaaaacaggctttcgttcaagcaggcgcgcctggctgtactgatc
ggcttcgcgctggggaccttgctgagcctgttccagattgcaatcgattatgccagcgaa
gacgcgtccatcaatcgtgaaatcaaatcactgctggaaatcatccagaacccggcatcg
cgcattgcctacaacatcgactcagagctggctcaggagctgacactcgggctgctgcgc
tcgcctgccgtggtcagcgcgagactgaccgataacaatgacgccgtgctcgcaagcgtc
gaacgccccatggcgacagggcgctatcgagtgttcagcgattggctgttcggtgaaagc
cgccagtttcaggaaaaactgcacctcaaccatttgccggatgaaaccatcggcacactg
tacctgaccgtggacaccttcgctttcggcagccactttctgcagcgcgccgagatcact
ctgctcaacggcttcgtgcgcagcctggcgctggccggcattctgaccattctgttctac
gccaccctgaccaagccgctggtaagggtgatccgcgaactgagcagtcgcgacccgcgc
aaccccgaccaagggaaaataacctgcccgcctcaccatgagcaggatgaaatcggcgta
ttggtcgcgaccttcaatcgtcaattcgaaaccatgggcagcgagttctccagacgacgc
gcggccgaagatcggctgaccgaacatctcaacgagctggaaaacattgtttcggcacgc
accaatgagctcaaggccagcaacatacgcctgcgcgaatccaacgaggaactacagata
gcgcgcagtacggcgctggacatggcccatgcgcgctcggcgtttctggcgcacatgagc
cacgaaatccgcaccccgctcaacggcctgctgggcatgctggcgctgtcactggacagc
ccgctcagcgccgagcagcgccagcaactgatgatcgcccacgactccggcaaggtgctg
gtcgaactgctcaacgatattctcgacatgtccaagttcgacgcaggtcatctggagatc
gagcgcattcccttcgaccttggggtgttgatcgaggacaccgccaacctgctgtcgcag
aatgcggcccccagcgtggagctgacctgcctgattgcgccggactttccggccatggtt
accggcgaccctacccgggtgcggcagatcgtcagcaacctgctgtccaacgcactcaag
ttcacccgttttgggcgcgtggatgtgcgtctgactcaccataaagatgtcagcggagaa
aaccgggtacgtatcgaagtccgtgacaccggcatcgggattgcgcaggacgcccaagcg
aaaatattccagccgttcactcaggcagaaaccgccatcactcggcagtatggcggcacc
gggctgggtctggcgctgaccaacaatctctgcgaggccatgaatggcacgctgagtatc
cagtcacagtccggcttcggcagtcagttctgcgccgagctgccgctgccggtgcatgtg
tccgctgtcactcagaccgcgctcaggggccgggtcactgtggtcagctcggccggcagc
ggcctggtggagctgcttggcaacctgctgccaacctggggggtcgatctcaagcgacgc
agcattgatgatcgcccggaagacgtggacctcgacagcagcccggacctggtcattacc
gactgccccgaatgcctgtttgcgattcgccccactacacccgtgccgatcctgctggtc
actgcctatggcaatttcatgcccggcgaacaggttacagcccttgccccgctgcaacag
caggctcgaccactggcgcgcaacgcgctttaccacacgctgcggcgtgtactgggtcag
gaagagacaggcgtcagggacacaaaagcgccagagcaaacggctcagcgcatggccaga
gtactgttggtggaagacaacccggtcaatcagctggtggccaagggcatacttggcaag
ctggggtgcgaagtgatcatcagcagtcacggcggcgaggccttggaacaattggagcaa
ggccactttgatctggtgttgatggactgcaacatgcccgtcatggacggctatgaagcc
agccgccagatccgcagcagcggccgctggccaaacctgccgatcgtggcgcttaccgcc
aacgccatgcccgatgaacgtgagcgctgcaaggcggcaggcatgaacgactacctggcc
aagccattccggcgcgccgaactggcgggcattctggaccagtggattcccatcgctgat
atccgctga
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