Pseudomonas amygdali: BKM19_022250
Help
Entry
BKM19_022250 CDS
T05354
Name
(GenBank) bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC
KO
K15461
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:
2.1.1.61
1.5.-.-]
Organism
pamg
Pseudomonas amygdali
Brite
KEGG Orthology (KO) [BR:
pamg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pamg03016
]
BKM19_022250
Enzymes [BR:
pamg01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.61 tRNA 5-(aminomethyl)-2-thiouridylate-methyltransferase
BKM19_022250
Transfer RNA biogenesis [BR:
pamg03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
BKM19_022250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAO
Methyltransf_30
NAD_binding_8
FAD_binding_3
Pyr_redox_2
GIDA
FAD_binding_2
Pyr_redox
3HCDH_N
HI0933_like
FAD_oxidored
Lycopene_cycl
Shikimate_DH
Thi4
AlaDh_PNT_C
NAD_Gly3P_dh_N
Motif
Other DBs
NCBI-ProteinID:
AVB15981
UniProt:
A0A2G4CNA0
LinkDB
All DBs
Position
4554832..4556814
Genome browser
AA seq
660 aa
AA seq
DB search
MTITRHARIDWDEQGNPRSRDFSDVYFSTESGLDETRHVFLVQNDLRRRFSELPEDGRLI
IGETGFGTGLNFLCAWQLFDECAPANARLQFVSVEKYPLSRADLQRALALWPELSPFAGQ
LLDQYVAVHEGFQRLAFDDGRVTLTLLIGDALQMLPQLDGQVDAWFLDGFAPAKNPEMWT
PELFAELARLSAPSATIGTFTSTGWVRRSLNAAGFKMKRVPGIGHKWEVLRGAFIAWPED
AAPSPAAKPWFARPAPISGERKALVIGAGLAGCATAQSLAQRGWQVSLLERHAAPAREAS
GNPQGVLYLKLSAHGTALSQLILSGFGHTRRLLERLQRGVDWDACGVLQLTFDDKEALRQ
KQLADAFPESLLHLLDQPAAEAQSGVALNSGGLFYPEGGWVHPPALCHAQAAHANIRLIA
HQQALELRRVDDQWQVWSDEQLIDSAPVVVLAGAADIKQFSQSADLPLKRIRGQITRLPQ
TQASAALRSVVCAEGYVAPARLGEHTLGASFDFNSTDLTPNLADHLDNLGLLREISEDLT
SRLETADLSPEQLQGRAAFRCTSPDYLPIVGPLADREAFLQAYAALGKDARQVPNIACPW
LDGLYVNSGHGSRGLITAPLCGELIAAWLDNEPLPLPRSVAEACHPNRFALRGLIRGGGK
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgaccattacccgccacgcccggatagactgggacgaacaaggcaacccgcgttcccgc
gatttctccgatgtctacttttccaccgagtccggtctggacgaaacgcgccatgtgttt
ctggtccagaacgacctgcgtcggcgtttcagcgagctgccggaggacggcaggctgatc
attggtgaaaccggattcggcaccgggctgaatttcctctgtgcctggcagttgttcgac
gagtgcgcgcccgccaatgcgcgcctgcagttcgtcagcgtcgagaaatacccgctgagc
cgcgccgacctgcagcgtgccctggcgttgtggccagagctgtcgccgttcgcgggtcaa
ttgctcgatcaatatgtggctgtgcatgaaggttttcagcgtctggcattcgatgacggc
cgcgtgaccctgaccctgctgattggtgacgcgctgcagatgctgccgcaactggacggg
caggtggacgcctggtttctcgacgggtttgcgccagcgaaaaacccggaaatgtggaca
cccgaactgtttgccgaactggcgcgcctgtctgcaccgagcgccacgataggcacgttt
accagcaccggctgggtgcggcgctcgctgaacgcagcaggcttcaaaatgaagcgggtg
ccgggcatcggtcataaatgggaagtgctgcgcggcgcgtttatcgcctggcctgaagat
gctgcaccctctcctgccgccaaaccctggttcgcccgccccgctccgattagcggcgag
cgcaaggcgctggtgatcggcgcagggctggcaggctgcgccacggcgcagagcctggcg
cagcggggttggcaggtcagcctgctggagcgccacgccgcacccgcgcgggaagcctcc
ggcaacccgcagggcgtgctgtacctgaagttatcggcgcatggcacagcgctttcacag
ttgatcctcagtggttttggccacacgcgaaggctgcttgaacgcttgcagcgcggagtc
gactgggacgcttgcggggtgctgcaactgaccttcgatgacaaggaagcgctgcgtcag
aaacagctggccgatgccttccccgaatcactcctgcacctgctcgaccaaccggcagcc
gaggcgcaaagcggcgttgcgctgaacagtggcgggctgttttaccccgagggcggctgg
gttcatccgcctgcgctgtgtcacgcacaggccgcgcacgccaatatccgtctgatcgct
catcagcaggcattggagctgagacgcgtcgatgatcagtggcaggtctggagtgacgaa
cagttgatcgacagtgctccggtcgtcgtgctggccggggcggcggatatcaagcagttt
tcgcagagcgccgatttaccgctcaaacgcatccgcgggcagatcacccgtttgccgcag
actcaggccagcgcggcattgcgcagtgtggtgtgcgccgaaggttatgtcgcgcccgcg
cgtctgggcgaacacacgctgggggccagtttcgatttcaacagcaccgatctgacgccg
aacctggccgatcatctggacaatctggggctgttgcgggagatctcggaagacctcact
tcgcgcctcgagaccgccgatttgtcgcccgagcagttgcagggtcgcgcagcctttcgc
tgtaccagcccggactacctgcccatcgtcgggccgctggccgatcgcgaagcattcctt
caggcctatgctgccctgggcaaggacgcgcgccaggtgcccaacatcgcctgcccgtgg
ctggacggcctgtacgtcaacagcggccacggttcgcgcgggctgatcaccgcgccgctg
tgtggcgaactgatcgccgcctggctcgataacgaacctctgcccttgccgcgtagcgtt
gccgaagcctgtcaccctaaccggtttgccctgcgcgggctgattcgcggcggcgggaag
tag
DBGET
integrated database retrieval system
