Pseudomonas amygdali: BKM19_022550
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Entry
BKM19_022550 CDS
T05354
Symbol
bamA
Name
(GenBank) outer membrane protein assembly factor BamA
KO
K07277
outer membrane protein insertion porin family
Organism
pamg
Pseudomonas amygdali
Brite
KEGG Orthology (KO) [BR:
pamg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
pamg03029
]
BKM19_022550 (bamA)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pamg02000
]
BKM19_022550 (bamA)
Mitochondrial biogenesis [BR:
pamg03029
]
Mitochondrial protein import machinery
Outer membrane
TOB/SAM complex
BKM19_022550 (bamA)
Transporters [BR:
pamg02000
]
Other transporters
Pores ion channels [TC:
1
]
BKM19_022550 (bamA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Omp85
POTRA
POTRA_1
ShlB
YqfD
Motif
Other DBs
NCBI-ProteinID:
AVB16029
UniProt:
A0AB35RAN4
LinkDB
All DBs
Position
4611816..4614188
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AA seq
790 aa
AA seq
DB search
MISSRLFLSFCLLFSVPLAHADTFSISDIRVNGLQRVSAGSVFAALPLNVGDQADEQRLA
DASRSLFKTGFFQDINVARDGNVLVINVVERPSIASIEIIGNKAISTEDLMKGLKQSGLS
EGEIFQRATLEGVRNELQRQYVAQGRYSASVDTEALPAPRNRIALKITIDEGTVASIQHI
NVVGNTVFSDEELADQFQLKTSNWLSFFKNDDKYAREKLSGDLERLRSWYLDRGYINMDI
NSTQVSLTPDKKGVFITVNITEGERYTVGSVKLGGDLKVPQAQLEQLILVKPGQVFSRKV
MTDTTNLITRRLGNDGYTFANVNGVPKANDADHTVDISFMVDPGKRAYANRINFRGNTKT
ADEVLRREMRQMEGGWASTYLIDQSKVRLERLGFFKEVNVETPAVPGTDDQVDINYAVEE
QASGNITASVGFAQSAGLILGGSISQNNILGTGNFASLGMTRSEYQTKYNFAFTNPYFTP
DGVSLGYNVFYNATDYSKYYDDDDEVSYYSLNSVGAGVNLGYPISETSRLTYGLSIQHDT
LDPGSYSADEIYDFIEREGSSFTNLKASVGWSESTLNKGVLATRGHSQSLTLTSTVPGSD
LQFYKLDYNGQTFLPLSDTTSLRLHTKLGYGNGYGDTDGLPFYENYTAGGQATVRGFKDG
TLGPRNTPATGTYASQGQIYYSDRDTEALGGNILITGGMEYLFPMPFVKDQKSLRTSLFW
DFGTVYADKSYLSTTQNCGNINIDQMASSVGVGVTWYSPLGPLSFDLAVPIKKPEDAETQ
VFQFSLGQTF
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgatttcttcgcgtctgtttctatcgttctgcctgttattcagcgtcccgctggcacac
gccgacactttttccatctcggacatccgcgtcaacggcctgcaacgcgtgtctgccggc
agcgtattcgctgcgctgccgctcaatgtcggcgatcaggccgatgaacagcgtctggcc
gacgcgtcgcgctcactgttcaagaccggtttctttcaagacatcaacgttgcccgcgac
ggcaacgtgctggtgatcaatgtcgtcgaacgcccgtccatcgcgagcatcgagattatc
ggcaacaaggcaatcagcacggaagacctgatgaaggggctgaagcagtcggggctcagt
gaaggtgaaatcttccagcgcgccactctggaaggtgtgcgcaatgaactgcaacgtcag
tacgttgctcaaggccgctacagtgcctcggtcgataccgaagcgttacctgcaccgcgt
aaccgcatcgcgctgaaaatcaccatcgatgaaggcaccgtggcgtccatccagcacatc
aatgtggtcggcaacacggtgttttcagatgaggagctggccgaccagtttcagctcaag
accagtaactggctgtcgtttttcaagaacgatgacaagtacgcccgcgaaaaactctcc
ggtgacctggaacgcttgcgttcgtggtacctggaccgcggctacatcaacatggatatc
aactcgacgcaggtatcgctgacgcctgacaagaaaggcgtgttcattaccgtcaatatc
accgaaggcgaacggtacaccgtgggcagcgtcaagctgggcggtgacctgaaagtgccg
caggctcagcttgaacaactgattctggtcaaaccgggccaggtgttttcacgcaaggtc
atgaccgataccaccaatctgatcacccgccgcctgggcaacgatggctataccttcgcc
aacgtcaacggtgtgccgaaagccaacgatgccgaccataccgtagacatcagctttatg
gtcgaccccggcaagcgggcctacgcaaaccgcatcaactttcgcggcaacaccaagact
gccgatgaagtgctgcgccgcgagatgcgccagatggaaggaggctgggcgtcgacctac
ctgatcgaccagtcgaaggtgcgtctggagcgtctgggtttcttcaaggaagtaaacgtc
gaaacgcctgctgtccccggtaccgacgaccaagtggacatcaactacgccgtggaagaa
caggcctcgggcaatatcaccgccagcgtaggctttgcccaaagcgccgggctgatactc
gggggctcgatctcgcagaacaacatcctcggcaccggtaacttcgccagcctcggcatg
acgcgctccgagtaccagaccaagtacaactttgcattcaccaacccatacttcacgcct
gacggtgtaagcctgggctacaacgttttctacaacgccactgattacagcaagtattac
gacgatgatgacgaggtgtcctactactcgctcaacagcgtcggtgcgggggtcaacctc
ggctacccgatcagcgaaacctcgcgcctgacctacggtttgtcgatccagcacgacacc
ctcgaccccggcagctacagcgccgacgagatctatgacttcatcgagcgtgagggctcg
tcattcaccaacctcaaggccagtgtcggctggtcggaatcgaccctcaacaaaggcgtg
ctggccacccgcggtcattcacaaagcctgaccctgaccagcaccgtgccgggcagtgac
ctgcagttctacaaactcgactacaacggccagaccttcctgccgctcagcgacaccacc
tcgctgcgcctgcacaccaaactgggctacggcaacggttacggcgacaccgatggcctg
ccgttctacgaaaactatacggcgggcggccaggccactgtgcgcggcttcaaggacggt
acgctgggaccacgcaataccccggccaccggcacctacgccagtcaggggcaaatctac
tactcggaccgcgacacagaagcgctgggcggcaacatcctgatcaccggtggcatggaa
tacctgttcccgatgcctttcgtcaaagaccagaaatccctgcgcacctcgctgttctgg
gacttcggcacggtctacgccgacaagtcctacctgagcaccacgcagaactgcggcaac
atcaatatcgaccagatggccagttcggtcggcgtcggcgtgacctggtactcgccgctc
ggcccgttgagcttcgacctcgccgtaccgatcaaaaagcccgaagacgccgagacccag
gtgttccagttctcgctgggccagaccttttga
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