Pseudomonas amygdali: BKM19_022590
Help
Entry
BKM19_022590 CDS
T05354
Name
(GenBank) mechanosensitive ion channel family protein
KO
K16053
miniconductance mechanosensitive channel
Organism
pamg
Pseudomonas amygdali
Brite
KEGG Orthology (KO) [BR:
pamg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pamg02000
]
BKM19_022590
Transporters [BR:
pamg02000
]
Other transporters
Pores ion channels [TC:
1
]
BKM19_022590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MS_channel_2nd
DUF5693
Motif
Other DBs
NCBI-ProteinID:
AVB16037
UniProt:
A0AB35RC02
LinkDB
All DBs
Position
4621190..4622482
Genome browser
AA seq
430 aa
AA seq
DB search
MDIHSLWLKTQELWDMLDQHPWVRTGLALVLLLTAALVLGRVARFVVLYAVKMLGRQPSL
HWVNDFRHNKVFHRLAQMVPSLVIQFGLTLVPGLSTAGRNVIGNIAMAFTILFMTLAIGT
LLNALLDIYARTEHARTRSIKGYVQLSKMILYVFAGIIIVATLIDRSPLLLLSGLGAMSA
VILLVYKDTLLSFVASVQLTSNDMLRVGDWIEMPQVGADGDVVDITLHTVKVQNFDKTIV
SIPTWRLMSESFRNWRGMQQSGGRRIKRSLFIDASGVRFVRDDEEQQLMQIHLLTDYIGR
KQAELLAWNQAQGNVAQMSANRRRMTNIGTFRAYALAYLKSHVDINPGMTCMVRQLEPTS
QGIPLEIYCFTRTTVWVEYERIQGDIFDYLITVMPEFGLSLYQQPSGADMRVGLRGETMS
QVTADWTRER
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atggatattcactcgctttggctcaagacccaggaactctgggacatgctcgaccagcac
ccgtgggtacgcaccgggctggcactggtcctgttgctgaccgccgcgctggtacttggt
cgtgtcgcgcgctttgtggtcctgtacgcggtgaagatgctcggccgtcagccgtccctg
cactgggtcaacgacttccgccacaacaaggtctttcaccgactggcgcagatggtgccg
tcgctggtcattcagttcggcctcacgctggtcccgggcctgagcactgcgggccgcaac
gtgatcggcaacatcgccatggcgttcaccatcctgttcatgacattagccatcggcacc
ctgctcaacgccctgctggacatctacgcgcgcactgaacacgcccgcacgcgctccatc
aagggttacgtgcaactgtcgaagatgatcctgtacgtcttcgccgggatcatcatcgtc
gccacactgatcgaccgttcgcccctgctactgctgtccggcctcggcgccatgtcggcg
gtcatcctgctggtctacaaggacaccctgctctccttcgtcgccagtgtgcagttgacc
agcaacgacatgctgcgcgtcggcgactggatcgaaatgccgcaggtcggcgcggacggc
gatgtggtggacatcaccctgcacaccgtcaaagtgcagaacttcgacaaaaccatcgtc
tccatccccacctggcgcttgatgtccgagtcgttccgcaactggcgcggcatgcagcaa
tcaggcgggcgacgcatcaagcgcagcctgttcatcgacgccagcggcgtgcgcttcgtg
cgtgacgatgaagaacaacaactgatgcaaatccacctgctcaccgactacatcggccgc
aaacaggccgaattactggcttggaaccaggcacaaggcaacgtcgcacaaatgtccgcc
aaccgccgacgcatgaccaacatcggcaccttccgcgcctacgccctggcgtacctgaaa
agccacgtcgacatcaatccaggcatgacctgcatggttcgccagctggagcctacttcg
cagggcatcccgctggaaatctactgcttcacccgcacgacggtgtgggtggagtacgag
cgcatacagggggatattttcgattatctgattacggtgatgccggagttcgggttgagt
ttgtatcagcagcctagtggggcggatatgcgggtggggttgaggggggagactatgagc
caagtcacagctgactggacgagagagcgttga
DBGET
integrated database retrieval system
