Pseudomonas amygdali: BKM19_022660
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Entry
BKM19_022660 CDS
T05354
Name
(GenBank) type I secretion C-terminal target domain-containing protein
Organism
pamg
Pseudomonas amygdali
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Paralog
GFIT
Motif
Pfam:
HemolysinCabind
Peptidase_M10_C
Pect-lyase_RHGA_epim
He_PIG
Beta_helix
NosD
Ig_DAG1
End_N_terminal
Motif
Other DBs
NCBI-ProteinID:
AVB16046
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Position
4633368..4638185
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AA seq
1605 aa
AA seq
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MIFNTKDFGAVGDGVTDDTAAIQATIDAAAAAGGGEVVLAAGTYIVSGGEEPSDGCLMLK
SNVTLSGAGMGETVIKLADGSDTKVTGIVRSAYGEETHDFGMKNLTLDGNRDATTGKVDG
WFNGYIPGSDGKDSNVTLDSVEIKDCSGYGFDPHEQTVNMVIKNSVSHGNGLDGFVADYL
SDSVFENNVAYDNDRHGFNVVTSTHDFTLSNNVAYGNGSTGIVVQRGSENIPSPANITIT
GGAVYGNGAEGVLIKLSSQVSVSGLDIHDNGSAGVRIYGSSGVDVFDNTLSNNSLGAPVP
EIIIQSYDDTSGVSGKYFNGSDNLIRGNVITGSDNSTYGVAERNEDGTDRNSIVGNTISH
TSKGLTLVYGDGSFAGDSFPLVTVQGTDANDAITGGAANEMILGLAGKDTLNGAAGDDIL
VGGAGADKLTGGAGADTFRFDQLTDSYRTATTSSTDLVTDFDISQDRIDLSNLGFTGLGS
GKGGTLNISYNATLDRTYVKSLDADASGNRFELGLSGNLKDTLNASHFIFQRVIEGTAGG
DTLTGTDGNDVMNGNAGTDRINGGAGADLINGGADADILTGGAGADLFIYNSRLDSYRNY
NASGTKQSDTITDFNPAEDRIDLSSIGLRGLGDGSANTIYLSVNADGSKTYIKTNAVDTT
GNRFEIALEGNLLDKLSASNFIFSTASAANQAPVLNTPLMDQNVTELKAFSYAVQPGSFS
DPDSNTLTYSATLADNSALPYWLKFDSKTLTFSGTPGGTASGLYSVLLTASDATGASVAD
SFAINVGNVTPGTLTGTENAEALYGTEGDDTILGLGGDDTLRGDTGADIINGGAGRDALY
GGDGADTFVYSTLTDSYRDYDAGGLTATDTIYDFTPGQDKIDVSALGFLGLGNGEDHTLY
MTLNEAGDKTYVKSATPDADGNRFEIALSGNLIDTLTDADFVFGQREAQEILYLPMLGQS
NARLLRMTEDDNQSGTSEMVKDLARYTDYDVRSQFTDANGDGIDLAVGGSTVVGYSTGTQ
EEQRVSWWLVDTDQPGPALLRATELLKSQLTSLTAIDKVTTGIIWGQGEEAAQEIARATD
KQAAADLYKASTLKVFDYLHAQIGDFTVYMAETGHYQTEAAKARGYTEEKINAIVEGAGY
VRNAQEAIANERADVKLAVDYTDLPLRYEVNPLVYPDDVWHLHEESAEIVGQRLADFIAD
DLGFRGDASDNNDPTAIFESGQNEGGNIFGTSDDDTLVGSAGNDVLDGDQGADDMTGGDG
NDIYVVDNALDTVTESNDSPSQVDTVVSSVSWQLGANVENLLLTGVSAINGTGNALKNVI
TGNASNNVLDGAAGADLLTGGDGSDSYYVDDAADRVVETNADQQVGGIDTVLSSLASYTL
GANLENIVITGTGAANATGNTLDNLIYAGAGDNVMDGRDGNDTVSYLFATAGVTVALNTS
AQQATGGSGLDTLKGTENLTGSQFADTLTGNKNANVLNGGSGNDTLSGGAGDDVLIGGSG
ADTLIGGTGADRYVFNNSNETGLGGLRDIINGFKAAEGDKLDFTGFDARPDAFVFIGNAA
FSANNTGELRFADGVLYGNLDDNIGADFEIQLTGVQSLQAADIIV
NT seq
4818 nt
NT seq
+upstream
nt +downstream
nt
atgatattcaacacaaaagactttggtgcagtgggcgacggcgtcacggacgatacagca
gccattcaggccactattgatgcagctgcagcggcgggtggtggggaagttgtgctggca
gccgggacctacattgtgtccggtggcgaggagccttccgacggctgcctgatgctcaaa
agcaacgtgaccctatcgggcgcgggcatgggcgagacagtcatcaagctggcggatggc
tcggacaccaaggtcaccggcatcgtgcgttccgcctacggcgaagagacccacgacttc
ggcatgaaaaatctgacactggacggtaaccgggacgccaccaccggcaaggtggacggc
tggttcaacggctacattccaggttctgacggcaaggattcgaacgttacgctcgacagc
gtcgagatcaaggactgctcgggctacggcttcgacccgcacgagcagaccgtcaacatg
gtgatcaaaaacagcgtatcccatggcaacggcctggacggcttcgtggccgattacctg
agcgacagcgtgtttgaaaacaacgttgcgtacgacaacgatcgtcacggcttcaacgtg
gtcaccagcacccacgacttcaccctgagcaacaacgttgcctatggcaatggcagcacc
ggcatcgtggtgcagcgcggcagtgaaaacatcccctcgcctgccaatatcaccatcacc
ggcggcgcggtctatggcaacggtgctgaaggcgtgctgatcaagctgtccagtcaggtc
tctgtcagtggcctggacattcacgacaacggcagtgccggtgtgcgcatctacggcagt
tccggggtggacgtgtttgataacaccctgagcaacaactccctcggcgccccggtgccg
gagattatcatccagtcttacgacgacacttcaggcgtttccggcaagtatttcaacggc
agcgacaacctgatccgcggcaacgtgattaccggcagcgacaactccacctacggcgtt
gccgagcgcaacgaagatggcaccgatcgcaacagcatcgtgggcaacaccatcagccac
accagcaaaggcctgacgctggtttatggtgacggcagctttgccggtgattcttttccg
ctggtcaccgtgcagggtaccgacgccaacgatgcgatcaccggcggcgccgccaatgaa
atgattctcgggctggctggcaaggacacgctcaacggcgctgcgggcgacgatattctg
gtcggcggtgcgggagccgacaagctcaccggcggcgcgggtgccgatacttttcgcttc
gatcagttgaccgacagctaccgtacagcgaccaccagttccaccgatctggtcaccgac
ttcgatatcagccaggaccgcatcgacctgagcaacctgggcttcaccgggctgggcagc
ggcaagggcggcacgctgaacatcagctacaacgccacgctggaccgcacttacgtcaaa
tcactcgacgccgatgccagcggcaaccgattcgagctgggcctgagcggcaacctgaaa
gacacgctcaatgccagccatttcatcttccagcgggtcatcgaaggcactgcgggcggc
gataccctgaccggcaccgacggcaacgacgtgatgaacggcaacgccggtacagaccgc
atcaatggcggtgccggtgcagatctcatcaatggcggggctgatgccgatattctgacc
ggtggcgcgggcgcggacctgttcatctacaactcgcgcctggacagctaccgcaattac
aacgccagcggcaccaagcagagcgacacgatcaccgacttcaaccctgccgaagaccgc
atcgatctgtccagcatcggcctgcgcggcctgggcgatggcagcgccaacaccatttac
ctgtccgtcaatgccgacggcagcaagacctacatcaagaccaatgcggtcgacaccacc
ggcaatcgcttcgagattgcactggaaggcaacctgctcgacaaactgagcgcgtccaac
ttcatcttctctacagcctcagccgccaatcaggccccggtacttaatacaccactgatg
gatcagaacgttaccgagttgaaggcgttttcctacgcggtacaaccgggcagtttcagt
gatccggacagcaacacgctgacctacagcgcgaccctggccgataacagcgccctgccc
tactggttgaagttcgacagcaagaccctgaccttcagcggcacgccgggcggcacggca
tccgggctttattcggtattgctgaccgcgagcgacgccaccggcgcttcggtggccgac
agttttgccatcaatgtgggcaacgtgacgccggggaccctcaccggcaccgaaaatgcg
gaagcgctgtatggcaccgaaggtgacgacaccattctcgggctgggtggcgacgatacg
ctgcgtggcgataccggtgccgacatcatcaacggtggcgctggccgcgacgcattgtac
ggtggagacggtgccgacacgttcgtctacagcacactcaccgacagctaccgcgattac
gatgctggcgggctgacggccaccgacacaatctatgacttcacccccggccaggacaaa
atagacgtctctgctctgggtttcctggggctgggcaacggtgaagatcacaccttgtac
atgaccctcaacgaagccggcgacaagacctatgtcaaatccgccacgccggatgccgac
ggcaatcgcttcgaaatcgccctgagcggcaacctgatcgacaccctgaccgatgcggac
ttcgtgttcggccagcgcgaggctcaggagattctctatctgccgatgcttggccagtcc
aacgcacgcctgctgcgcatgaccgaagacgacaatcagtccggcacctcggaaatggtc
aaggacctggcccgttacaccgattatgacgtgcgcagccagttcaccgacgccaacggt
gatggcatcgaccttgccgtaggcggcagcaccgtggtcggctattcgaccggcacgcag
gaagaacagcgtgtttcgtggtggctggtggataccgatcagccaggccctgcgctgctg
cgtgcaaccgaactgctcaagtcgcaactgacgtcactaacggctatcgacaaagtgacc
accgggattatctggggtcagggtgaagaagccgcgcaggaaatagcccgcgccacggac
aagcaggctgcagccgacctgtacaaagcctcgaccctgaaggtgttcgattacctgcac
gcgcagataggcgacttcaccgtgtacatggccgaaaccggccactatcagaccgaggcg
gccaaggcacgtggctacaccgaagaaaagatcaacgctattgtcgagggtgccggatac
gtcagaaacgctcaggaagccatcgccaatgagcgtgccgacgtcaagctggcagttgac
tacaccgacctgccgttgcgttacgaggtcaacccgctggtctaccccgatgacgtctgg
cacctgcacgaagagtccgccgaaatcgtcggtcagcgcctggccgacttcattgccgat
gacctgggttttcgtggcgatgccagcgacaacaacgacccgaccgccattttcgagagt
ggccagaatgaaggcggcaacatcttcggcaccagtgacgacgacacattggtgggcagc
gccggcaatgacgtgctggatggcgatcagggcgcagatgacatgaccggcggggacggc
aacgacatctatgtagtcgataacgcactcgataccgtcaccgagagcaatgattcgcca
tcgcaggttgataccgtggtgtcttccgtcagttggcagttgggggcgaacgtggaaaac
ctgctgcttaccggcgtatctgccatcaacggcaccggcaatgcgctgaaaaacgtcatc
accggcaatgccagcaacaatgttctcgacggcgcagcgggtgccgacctgctgaccggc
ggcgacggatcggacagttattacgttgacgatgcagccgaccgagtggtcgagaccaac
gcagatcagcaggtaggcggcatcgacacggtgctcagttcgctggccagctacacgctg
ggggccaacctggaaaacatcgtcatcaccggcacaggggcggcgaacgcaaccggcaat
acccttgataacctgatctacgcaggcgctggcgacaacgtcatggacggtcgtgacggc
aatgacacggtgtcttatctgtttgccacggcaggcgttacggttgcgctgaacaccagc
gctcaacaggccaccggcggctccgggttggacacgctcaagggtacagagaacctgact
ggcagccagtttgccgacacgttgaccggcaacaaaaacgccaacgtcctgaacggcggc
agtggcaatgacaccttgtccggcggcgcgggtgacgacgtactgatcggcgggtcaggc
gctgatacgctgattggcggcaccggtgcagaccgttacgtgttcaacaacagcaacgag
acaggcctgggcggcctgcgcgacatcataaacggcttcaaggcagccgaaggcgacaag
ctggacttcacaggcttcgatgcccgacccgatgcgttcgtgttcattggcaacgcggcg
ttcagcgccaacaacaccggcgagcttcgcttcgccgatggggtgctgtacggcaatctc
gatgacaacatcggggcggactttgaaatccagctgactggcgtgcagagtctgcaagcg
gccgatatcatcgtctga
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