Pseudomonas amygdali: BKM19_022715
Help
Entry
BKM19_022715 CDS
T05354
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pamg
Pseudomonas amygdali
Pathway
pamg00061
Fatty acid biosynthesis
pamg00071
Fatty acid degradation
pamg01100
Metabolic pathways
pamg01212
Fatty acid metabolism
pamg02024
Quorum sensing
pamg04146
Peroxisome
Module
pamg_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pamg00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
BKM19_022715
00071 Fatty acid degradation
BKM19_022715
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
BKM19_022715
09145 Cellular community - prokaryotes
02024 Quorum sensing
BKM19_022715
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pamg01004
]
BKM19_022715
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pamg04147
]
BKM19_022715
Enzymes [BR:
pamg01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
BKM19_022715
Lipid biosynthesis proteins [BR:
pamg01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
BKM19_022715
Exosome [BR:
pamg04147
]
Exosomal proteins
Exosomal proteins of breast milk
BKM19_022715
Exosomal proteins of breast cancer cells
BKM19_022715
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
AVB16056
UniProt:
A0AB35R9H9
LinkDB
All DBs
Position
complement(4655582..4657273)
Genome browser
AA seq
563 aa
AA seq
DB search
MIDNFWKDKYPSGIPADINPDEYPNVQAVLKQSCQRFADKPAFSNLGKTITYGELYELSG
AFAAWIQQHTDLQPGDRIAVQLPNVLQYPIAVFGAIRAGLIVVNTNPLYTAREMEHQFND
SGAKALVCLANMAHLAEKVVPKTQIRQVIVTEVADMLSPFKRLLINSVIKYVKKMVPVYH
LPKAIKFNDVLGKGRGQPVTDVSPGSADVAVLQYTGGTTGVAKGAMLTHRNLIANMLQCR
ALMASNLGEGCEIIITPLPLYHIYAFTFHCMAMMLLGNHNILISNPRDLPAMVKELSKWK
FSGFVGLNTLFVALCNNEGFRNLDFSALKVTLSGGMALQQSAAERWKQVTGCQVCEGYGM
TETSPVATVNPAKDVQMGTIGIPVPSTLCKVIDDAGNELAFGETGELCIKGPQVMKGYWK
RQEATDEMLDSDGWLKTGDIAIIQPDGYIRIVDRKKDMILISGFNVYPNELEDVLATLPG
VLQCAAIGVPDEKSGETIKVFVVAKPGVTLTKEQVMEHMRANLTGYKVPRSVEFREVLPT
TNVGKILRRELRDEELKKLGVKK
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgattgataacttctggaaggacaagtacccgtccggtatccctgccgatatcaacccc
gacgagtaccctaacgtccaggcggtcctgaagcagtcctgccagcgcttcgccgacaag
ccggcgttcagcaacctgggcaagaccatcacctacggcgagctgtatgagctgtccggc
gcgtttgccgcctggattcagcaacataccgacctgcagccgggtgaccgtatcgccgtg
cagctacccaacgtattgcagtacccgattgccgtcttcggtgcgattcgcgccgggctg
atcgtggtcaacaccaacccgctgtacaccgcgcgggaaatggaacaccagttcaacgac
tccggtgccaaggcgctggtgtgtctggcaaacatggcccatctggccgagaaggtcgta
cccaagacgcagatcaggcaggtgattgtcaccgaagtggccgacatgctgtcgccgttc
aagcgcttgctgatcaatagcgtcatcaagtacgtgaagaagatggtcccggtctatcac
ttgcccaaggccatcaaattcaacgatgtgcttggcaagggccgtggtcagccagtgacc
gacgtgtcgcccggcagcgccgatgttgccgtgctgcagtacaccggcggcaccaccggg
gtggccaagggggcaatgctgacgcaccgcaacctgatcgccaacatgctgcaatgccgc
gcgctgatggcgtcaaatctgggcgaaggctgtgaaatcatcatcacgccgctgccgctg
tatcacatctatgccttcacctttcattgcatggcgatgatgctgcttggcaatcacaac
atcctgatcagcaaccctcgtgacctgccggccatggtcaaggagctttcgaaatggaag
ttcagcggctttgtcggccttaacacgctgtttgtggccctgtgcaataacgagggtttc
cgcaacctcgacttttcggcgttgaaagttaccctgtccggcggcatggccctgcagcag
tccgctgccgaacgctggaagcaggtcactggctgccaggtctgcgaaggctatggcatg
accgagaccagcccggtggctacggtcaatcccgctaaagacgtgcagatgggcactatc
ggtattcctgtgccgtcgacgctgtgcaaggttatcgacgatgctggcaacgagctggcg
ttcggtgaaaccggcgagttgtgcatcaagggccctcaggtcatgaaaggctactggaag
cgccaggaagccaccgatgaaatgctcgacagtgatggctggctcaagaccggtgacatc
gcaatcatccagcccgatggctacatccggattgtcgatcgcaagaaagacatgattctg
atctccggtttcaacgtataccccaacgaactggaagacgtgctggccacgctcccgggc
gtgttgcaatgcgcggcgatcggcgtgccggacgagaagtcaggcgaaaccatcaaggtt
ttcgtcgtggccaaaccgggcgttaccctcaccaaggaacaggtcatggagcacatgcgc
gccaacctgaccggctacaaggtgccgcgtagcgtggaattccgggaggttctgcccact
accaacgtcggcaagatcctgcgtcgcgagctgcgtgatgaggaattgaagaagctgggc
gtgaagaagtag
DBGET
integrated database retrieval system
