Pseudomonas amygdali: BKM19_022725
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Entry
BKM19_022725 CDS
T05354
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pamg
Pseudomonas amygdali
Pathway
pamg00061
Fatty acid biosynthesis
pamg00071
Fatty acid degradation
pamg01100
Metabolic pathways
pamg01212
Fatty acid metabolism
pamg02024
Quorum sensing
pamg04146
Peroxisome
Module
pamg_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pamg00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
BKM19_022725
00071 Fatty acid degradation
BKM19_022725
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
BKM19_022725
09145 Cellular community - prokaryotes
02024 Quorum sensing
BKM19_022725
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pamg01004
]
BKM19_022725
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pamg04147
]
BKM19_022725
Enzymes [BR:
pamg01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
BKM19_022725
Lipid biosynthesis proteins [BR:
pamg01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
BKM19_022725
Exosome [BR:
pamg04147
]
Exosomal proteins
Exosomal proteins of breast milk
BKM19_022725
Exosomal proteins of breast cancer cells
BKM19_022725
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
AVB16057
UniProt:
A0AB35R6P2
LinkDB
All DBs
Position
complement(4657627..4659315)
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AA seq
562 aa
AA seq
DB search
MQADFWDDKRPAGVDAEVDLQSYQSVVEVFERCCRKFADRPAFSNMGVTLTYAELERHSA
AFAAYLQQHTQLVPGDRIAVQMPNILQYPIAVFGAMRAGLTVVNTNPLYTAREMRHQFKD
SGARALVYLNLFGKLVQEVLPDTAIEYLIEVKMGDMQSAAKGWLVNTLVDKVKKMVPEFH
LPQAVGFKRALRLGRESRMQVVPRGLQDVAVLQYTGGTTGLAKGAMLTHGNLVANMQQVY
ACMRQQGPQGGSLFEEGKEVMIAPLPLYHIYAFTANCMCMMISGNHNILITNPRDIGGFI
KELGKWRFTAMIGLNTLFVALMNHPEFKNLDFSALKSTNSGGTALVKATAERWAQITGCT
IVEGYGLTETSPVASANPYGALARLGTVGMPVPGTAMKVINDDGIELPFGERGELCIKGP
QVMKGYWNQPDATAECLDAEGWFKTGDIAVIGADGFVSIVDRKKDLIIVSGFNVYPNEIE
DVVMAHPKVANCACIGVPDERSGEAVKLFVVARDPQLSIEELKAFCKENFTGYKVPRQIV
LRDSLPMTPVGKILRRELRDIA
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgcaagctgacttctgggatgacaagcgtccggcgggtgtcgacgccgaggtggatctg
caaagctaccaatcggtcgtcgaggtgttcgagcgctgctgcaggaaattcgccgaccgg
cctgcgttcagcaacatgggcgtgacgctgacttacgcggaactcgagcgtcactccgcc
gccttcgccgcgtatctacagcagcatactcaactggtgccgggtgatcgcattgccgta
cagatgcccaatatcctgcaatatccgatcgccgtattcggtgcgatgcgcgcaggtctg
acggtggtcaacaccaacccgttgtacaccgcacgcgagatgcgccatcaattcaaggac
tctggtgccagagcgctggtttacctcaacctgttcggcaagctggtgcaggaagtgctg
ccggacacggccatcgaatacctgatcgaagtaaaaatgggcgacatgcagtcggcggcc
aagggctggctggtcaatacccttgtcgacaaggtcaagaagatggttcccgaattccat
ctgcctcaggccgtcggcttcaagcgcgcgctgcgcctggggcgcgagagccgcatgcag
gtcgtaccgcgaggtctgcaggatgttgccgttctgcaatacaccggtggcaccacgggg
ctggccaaaggcgcgatgctcacccatggcaatctggtcgccaacatgcagcaagtctat
gcctgcatgcgccagcaaggaccgcaaggcggatcgctgtttgaagagggcaaggaggtg
atgattgcgccgttgccgctctatcacatctatgcgttcacggcgaactgcatgtgcatg
atgatcagcggcaatcacaacatcctgatcaccaaccctcgcgatatcggcggcttcatc
aaggagctgggcaagtggcgcttcactgccatgatcggcctcaacacgctgttcgtggcg
ctcatgaaccacccggaattcaagaatctggatttctcggcgctgaaaagcaccaactcc
ggtggcactgcactggtcaaggccacggccgagcgctgggcgcagatcaccggctgcacg
atcgtcgaaggttacggcctgaccgagacgtcgcctgtcgccagcgccaatccctatggc
gccctggcacgcctgggaaccgtgggcatgcccgtgcccggcaccgcgatgaaagtcatt
aatgacgatggcatcgagttgcctttcggcgagcgtggcgagctgtgtatcaaggggccg
caggtcatgaaaggctactggaaccagcctgatgccacggccgaatgcctggacgccgaa
ggctggttcaagaccggtgacattgccgtgattggcgctgacgggttcgtcagtatcgtc
gaccgcaagaaagacttgatcatcgtgtccggcttcaacgtctaccccaatgaaatcgaa
gacgtggtcatggcccatccgaaagtcgccaactgcgcctgtatcggcgtgccggacgag
cgctcgggggaggccgtgaagctgttcgtggtggcgcgagacccgcagctgagcattgaa
gagctcaaggccttctgcaaagagaatttcaccggctacaaggtgcccagacagatcgtt
ctgcgtgattcattgccgatgactccggtgggcaagattctgcgacgcgagcttcgggac
atcgcctga
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