Pseudomonas amygdali: BKM19_022740
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Entry
BKM19_022740 CDS
T05354
Name
(GenBank) type III helper protein HopAK1
KO
K01732
pectin lyase [EC:
4.2.2.10
]
Organism
pamg
Pseudomonas amygdali
Brite
KEGG Orthology (KO) [BR:
pamg00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
BKM19_022740
Enzymes [BR:
pamg01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.10 pectin lyase
BKM19_022740
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GFIT
Motif
Pfam:
Pectate_lyase_4
Motif
Other DBs
NCBI-ProteinID:
AVB16060
UniProt:
A0AB35RB67
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Position
4660324..4661898
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AA seq
524 aa
AA seq
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MNMITRNYYPVSGQPTQGINPQADNSPPPQVTSGNGSKLVDFAPPQQATGLQSSFNGLGS
RAQTPATNAASGATENPVELLLNKLVEAIRTILKDLFSRSQGHQQDGSTPAPAPSEREQA
PTSLQSSSAPSSGSPSSSGNTEKPFVVKNDYPTDKPVSLQKSATAAPSDTARTSASAQGN
TPAANQSAPAKTLPTATDRSETTEKVAQPAHRAGNGPGADMSGMVGFAKQANTTGGNGGE
VVTVNTVADLKKYMEDDKARTVKLGANLSADSKVTINFGANKTLLGTDKGNSLHNIYLAS
GKTASNDIFQNLNFDHDSRYRENGDMQMFISSGQKYWIDHNTYSGTKDQNAKGLDKLLYV
GGTADNVSLTNSKLQNNEYGVILGQPDDSAQAKAEYKGYPRMTIANNVFSNLDVRAPGLM
RHGDFDVYNNSIDNFHLGFTATGDATILSQANYFAKGVDVSNKASNSGALDDYGDAHFKD
IGSNVSFTQKSPVTAWTPSYQRDIKTAEAARAYDLANAGAKTVS
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgaatatgatcacccgaaattattatcccgtctccgggcagccaacccagggcataaac
ccgcaagccgataacagtccgccacctcaggtcacgtccggcaatggcagcaagctggtc
gacttcgcaccgccgcagcaggcaacagggttgcagtcgtcgttcaatggccttggctcc
agggcgcaaacgcccgctacaaacgcagcctcgggtgcaactgaaaaccccgtcgagttg
ttgctgaacaagctggtggaagccattcgcaccatcctcaaggatctgttttccagatca
caagggcatcagcaggacggctcgacaccggcacctgcgccgtctgaacgggaacaggcg
ccgacctcccttcagtcttcatcagccccctcttcagggtcgccgtcatcgtccggcaac
acagaaaagccgttcgtggtgaaaaacgattatccgaccgacaaaccggtctcgctgcaa
aagagcgccacagcagcgccgtctgatacggcgcgcacttcggcgtcagcccaaggcaat
acgccagccgccaatcagtctgcgcccgccaaaacgttgccaaccgccacagacagatct
gagaccacagaaaaagtggcgcaacccgcgcaccgagcgggcaacggtcctggggccgac
atgtccggaatggtcggcttcgccaaacaggcgaacaccaccggcggtaatggtggcgaa
gtcgtcacggtcaataccgtagcggacctcaagaagtacatggaggacgacaaagcccgt
accgtcaaactgggggccaacctgtctgccgacagcaaggtgaccatcaactttggcgcc
aacaagaccctgctgggtaccgacaagggcaacagcctgcacaacatctacctggccagc
ggcaagaccgccagcaatgacatcttccagaatctgaacttcgaccacgacagccgttat
cgcgaaaacggtgacatgcagatgttcatcagcagcggtcagaaatactggatcgatcac
aacacctattcaggcaccaaggatcagaacgccaaaggcctggacaaactgctttatgtc
ggcgggacggcagacaacgtcagtctgaccaactcgaaactccagaacaacgaatatggc
gtgattctcggtcagccggacgactccgctcaagccaaggccgagtacaagggttacccg
cgcatgaccatcgccaacaatgtgttcagcaacctggatgttcgggcacccggcctgatg
cggcatggcgactttgacgtttacaacaactcgatcgacaacttccatcttggcttcacc
gcgacgggggatgcgaccatcctctcgcaggccaactatttcgcaaaaggcgtggatgtt
tccaacaaggccagcaactccggcgcgctggatgactatggcgatgcgcacttcaaggac
atcggcagcaatgtcagcttcacccagaagtcaccggtgaccgcctggacgcccagctat
cagcgcgacatcaagaccgccgaagccgccagagcctatgacttggccaatgccggcgcc
aaaaccgtgagctga
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