Pseudomonas amygdali: BKM19_023135
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Entry
BKM19_023135 CDS
T05354
Name
(GenBank) DeoR/GlpR family transcriptional regulator
KO
K02444
DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor
Organism
pamg
Pseudomonas amygdali
Brite
KEGG Orthology (KO) [BR:
pamg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pamg03000
]
BKM19_023135
Transcription factors [BR:
pamg03000
]
Prokaryotic type
Helix-turn-helix
DeoR family
BKM19_023135
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DeoRC
HTH_DeoR
HTH_11
HTH_PafC
MarR
HTH_Crp_2
GntR
MarR_2
Put_DNA-bind_N
HTH_20
HTH_Mga
Sigma70_r4_2
Sigma70_r4
CoA_trans
HTH_28
Motif
Other DBs
NCBI-ProteinID:
AVB16128
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Position
4740438..4741193
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AA seq
251 aa
AA seq
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MNLPPRQQQILELVRDRGYVSIEEMATLFVVTPQTIRRDINQLAEMNLLRRYHGGAAYDS
SIENTAYAMRADQMRDEKQRIAEAIAAQIPDNASLFINIGTTTESIARALLNHNNLKIIT
NNLHVASILSTKDDFEVLIAGGNVRRDGGVVGQGSIDFITQFKVDFALVGISGIDEDGSL
LDFDYQEVRVSQAIIANARKVLLAADSSKFGRNAMVRLGPITLIDCLVTDQPPVPALQQL
LNQHKIRLEVV
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atgaacctgcctccccgccaacaacagatcctcgaactggtccgtgaccgtggttacgtc
agcattgaggaaatggcgacgctgttcgtcgtgaccccacaaaccatccgccgtgatatc
aatcaactggcggaaatgaatctgctgcgtcgctaccacggcggcgcggcctatgactcc
agcatcgaaaacaccgcctacgccatgcgtgcggatcagatgcgcgacgaaaaacaacgg
atcgccgaggccatcgccgcgcagatcccggacaacgcctcgttgttcatcaatatcggc
accaccaccgaatccatcgcacgcgccctgctcaaccacaacaacctgaaaatcatcacc
aataacctgcatgtggcatcgatcctcagtaccaaggatgatttcgaggtcctgatagct
ggcggcaatgtgcgtcgtgacggcggcgtcgtgggccagggaagtatcgacttcattacc
cagttcaaggtggacttcgccctggtcggcatcagcggtattgatgaagacggcagcctg
ctggatttcgattatcaggaagtacgggtttcccaggcgatcatcgccaacgcacgcaaa
gtgctgctggcggctgactccagcaagttcgggcgtaatgcgatggtccgcttggggcca
atcaccctcatcgactgcctggtaaccgaccagccccctgttcccgcgctgcagcagttg
ctgaatcagcacaaaattcgtctggaagtagtgtga
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