Pseudomonas amygdali: BKM19_023715
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Entry
BKM19_023715 CDS
T05354
Name
(GenBank) TetR family transcriptional regulator
KO
K03577
TetR/AcrR family transcriptional regulator, acrAB operon repressor
Organism
pamg
Pseudomonas amygdali
Brite
KEGG Orthology (KO) [BR:
pamg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pamg03000
]
BKM19_023715
Transcription factors [BR:
pamg03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
BKM19_023715
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Gene cluster
GFIT
Motif
Pfam:
TetR_C_2
TetR_N
TetR_C_6
TetR_C_11
TetR_C_13
T_hemolysin
Motif
Other DBs
NCBI-ProteinID:
AVB16219
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Position
complement(4864631..4865275)
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AA seq
214 aa
AA seq
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MVRRTKEEAQITRSQILEAAEQAFYERGVARTTLADIATLAGVTRGAIYWHFNNKADLVQ
AMLDSLQEPLDEMAQASQSEEEEDPLGCMRNLLIHLFHELALDPKTRRINEILFHKCEFT
DEMCDFRRQRQDNAIQCHDRITLGLNNAVRQGQLPKDLDTARAAVALFSYVNGIIYQWLL
VPDSFSLPAEAEQLVDVCLDMLRFSPTLRISKAS
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atggttcgtcgcaccaaagaggaagctcagatcactcgcagccagattctggaggctgcc
gagcaggctttttatgagcgaggcgtcgcccgcaccacgctggctgacatcgcaaccctt
gctggtgtgacgcgaggagccatttactggcacttcaacaataaggccgatctggtccag
gcaatgctcgacagtcttcaggaaccactcgatgaaatggcgcaggccagtcagagcgaa
gaggaagaagacccactgggctgtatgagaaatcttttgattcatttgtttcatgagctc
gcactggacccgaaaacccgtcgcatcaatgaaatcctgtttcacaaatgcgagtttact
gacgagatgtgtgattttcgtcgtcagcgccaggacaacgccatacagtgccacgaccgg
atcaccctggggctgaacaatgccgtacgtcaggggcaacttccaaaagatctcgacacg
gcccgtgccgcagtcgccctgttttcttacgtaaacggcatcatttatcaatggctgctg
gttccagacagcttttcattgccggcagaggccgagcaactggttgatgtgtgtctggac
atgctgcgcttcagccctacgctaagaatcagcaaggcttcctga
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