Pseudomonas amygdali: BKM19_023855
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Entry
BKM19_023855 CDS
T05354
Name
(GenBank) fumarate hydratase
KO
K01676
fumarate hydratase, class I [EC:
4.2.1.2
]
Organism
pamg
Pseudomonas amygdali
Pathway
pamg00020
Citrate cycle (TCA cycle)
pamg00620
Pyruvate metabolism
pamg00720
Other carbon fixation pathways
pamg01100
Metabolic pathways
pamg01110
Biosynthesis of secondary metabolites
pamg01120
Microbial metabolism in diverse environments
pamg01200
Carbon metabolism
Module
pamg_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pamg_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
pamg_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
pamg00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
BKM19_023855
00620 Pyruvate metabolism
BKM19_023855
09102 Energy metabolism
00720 Other carbon fixation pathways
BKM19_023855
Enzymes [BR:
pamg01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.2 fumarate hydratase
BKM19_023855
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Gene cluster
GFIT
Motif
Pfam:
Fumerase
Fumerase_C
DUF6187
Motif
Other DBs
NCBI-ProteinID:
AVB16245
UniProt:
A0AB35R7Z0
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All DBs
Position
4896559..4898082
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AA seq
507 aa
AA seq
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MTVIKQDDLIQSVADALQFISYYHPVDFIQAMHEAYLREESPAARDSIAQILINSRMCAT
GHRPICQDTGIVTVFVRVGMDVRWDGATMGLDDMINEGVRRAYNLPENVLRASILADPAG
ARKNTKDNTPAVIHYSIVPGNTVEVDVAAKGGGSENKSKMAMLNPSDSIVDWVLKTVPTM
GAGWCPPGMLGIGIGGTAEKAAVMAKEVLMESIDIHELKARGPQNRIEEMRLELFEKVNQ
LGIGAQGLGGLTTVLDVKIMDYPTHAASLPVCMIPNCAATRHAHFVLDGSGPASLEAPSL
DAYPEIVWEAGPSARRVNLDTLTPEEVQSWKPGETVLLNGKMLTGRDAAHKRMVEMLNKG
ESLPVDLKGRFIYYVGPVDPVREEVVGPAGPTTATRMDKFTRQILDQTGLLGMIGKSERG
PTAIEAIRDHKAVYLMAVGGAAYLVAQAIKKSRVVAFAELGMEAIYEFEVKDMPVTVAVD
STGESVHITGPQIWQKKISDSLAVEVQ
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtgatcaagcaagacgacctgattcagagcgttgcagacgcactgcagttcatt
tcctactaccaccccgtggatttcatccaggccatgcacgaggcgtatctgcgtgaagaa
tcgcctgccgctcgcgactccatcgcccagatcctgatcaactcgcgcatgtgcgcgacc
ggtcatcgcccgatctgccaggacaccggcatcgtcaccgttttcgtacgcgtgggtatg
gatgttcgctgggatggtgccaccatgggcctggacgacatgatcaacgaaggcgtgcgt
cgcgcttacaacctgcctgaaaacgtgctgcgtgcctcgatcctcgccgacccggcaggc
gctcgcaaaaacaccaaggacaacaccccggctgttatccactactccatcgttccaggt
aataccgtggaagtggacgtcgcggcgaaaggcggcggttcggaaaacaaatcgaagatg
gcgatgctcaacccgtccgattcgatcgtcgactgggtcctgaaaaccgttccgaccatg
ggcgcaggctggtgcccaccgggcatgctcggcatcggcatcggcggcaccgcggaaaag
gcagcggtcatggccaaggaagtgttgatggagtccatcgacattcatgagctgaaggcc
cgtggcccgcagaaccgcatcgaagagatgcgtctggaactgttcgaaaaggtcaaccag
ctgggcataggtgctcagggcctgggtggtctgaccaccgtgctcgacgtcaagatcatg
gattacccgacccatgctgcgtcgctgccggtgtgcatgatccctaactgcgcggccacc
cgccacgcgcacttcgtactcgacggcagcggccctgcctcgctggaagcgccgtcgctg
gacgcctacccggaaatcgtctgggaagctggcccatcggcccgccgcgtcaacctcgac
accctgaccccggaagaagtgcaaagctggaagccgggcgaaaccgtgctgctcaatggc
aagatgcttaccggacgcgacgccgcgcacaagcgcatggtcgaaatgctcaacaagggc
gaaagcctgccggtcgacctcaagggtcgtttcatctactacgtcggcccggttgatccg
gtacgcgaagaagtcgttggcccggcaggcccaaccacggccacgcggatggacaagttc
acccgtcagatcctcgaccagaccggcctgctgggcatgatcggcaaatccgaacgcggc
ccgaccgccatcgaagcgatccgtgaccacaaagccgtgtatctgatggccgtcggcggc
gctgcatacctcgtggctcaggcgatcaagaaatcccgagtcgtggcttttgccgagctg
ggtatggaagcgatctacgagttcgaggtcaaggacatgccggttaccgttgccgtagac
agcaccggcgaatccgtgcacatcacaggcccgcagatctggcagaagaagatcagcgac
agtctggcggtggaagtgcagtaa
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