Pseudomonas amygdali: BKM19_024030
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Entry
BKM19_024030 CDS
T05354
Symbol
groL
Name
(GenBank) molecular chaperone GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
pamg
Pseudomonas amygdali
Pathway
pamg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pamg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BKM19_024030 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pamg03019
]
BKM19_024030 (groL)
03110 Chaperones and folding catalysts [BR:
pamg03110
]
BKM19_024030 (groL)
03029 Mitochondrial biogenesis [BR:
pamg03029
]
BKM19_024030 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pamg04147
]
BKM19_024030 (groL)
Enzymes [BR:
pamg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
BKM19_024030 (groL)
Messenger RNA biogenesis [BR:
pamg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
BKM19_024030 (groL)
Chaperones and folding catalysts [BR:
pamg03110
]
Heat shock proteins
HSP60 / Chaperonin
BKM19_024030 (groL)
Mitochondrial biogenesis [BR:
pamg03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
BKM19_024030 (groL)
Exosome [BR:
pamg04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
BKM19_024030 (groL)
Exosomal proteins of other body fluids (saliva and urine)
BKM19_024030 (groL)
Exosomal proteins of breast cancer cells
BKM19_024030 (groL)
Exosomal proteins of colorectal cancer cells
BKM19_024030 (groL)
Exosomal proteins of bladder cancer cells
BKM19_024030 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
AVB16277
UniProt:
A0AB35R3G8
LinkDB
All DBs
Position
complement(4928485..4930128)
Genome browser
AA seq
547 aa
AA seq
DB search
MAAKEVKFGDSGRKKMLAGVNVLADAVKATLGPKGRNVIIEKSFGAPLITKDGVSVAKEI
ELKDRFENMGAQLVKDVASRANDDAGDGTTTATVLAQAIVNEGLKAVAAGMNPMDLKRGI
DKATIAIVAELKKLSKPCTDTKAIAQVGTISANSDHSIGDIIAEAMEKVTKDGVITVEEG
SGLENELSVVEGMQFDRGYLSPYFINKPDTMVAELDSPLLLLVDKKISNIREMLPVLEAV
AKAGRPLLIVAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIAVLTGGTV
ISEEIGLSLETTTLEHLGNAKRVILNKENTTIIDGAGVKTDIDSRISQIRQQIGDTSSDY
DKEKLQERLAKLSGGVAVIKVGAGSEVEMKEKKARVEDALHATRAAVEEGVVPGGGVALV
RSLQAIEGLKGDNADQDVGIALLRRAVEAPLRQIVANSGDEPSVVVDKVKQGSGNFGYNA
ASGEYGDMIEMGILDPAKVTRSALQAASSIASLMITTEAMIADVPEDKPAGGGMPDMGGM
GGMGGMM
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggctgctaaagaagttaaattcggcgattctggccgcaaaaaaatgctcgccggtgta
aacgtcctggctgacgcagttaaagcgaccctgggccctaaaggccgtaacgttatcatc
gagaaaagctttggcgctccgctgattaccaaagacggtgtgtcggttgccaaggaaatc
gagcttaaagaccgtttcgaaaacatgggcgcgcagctggtcaaagacgttgcctcccgt
gccaacgatgacgccggtgacggtactaccaccgctaccgttctggctcaggctatcgtc
aacgaaggcctgaaggctgtcgctgccggcatgaacccgatggacctcaagcgcggcatc
gacaaggcgaccatcgccatcgttgcagagctgaagaagctgtccaagccttgcaccgac
accaaggcaattgctcaggtcggcaccatttcggccaactctgatcactccatcggcgac
atcattgccgaagccatggaaaaagtgaccaaagacggcgttatcaccgttgaagaaggt
tcgggcctggaaaacgagctgtctgttgtagaaggcatgcagtttgaccgcggttacctg
tctccgtacttcatcaacaagccagacaccatggttgccgagctggacagcccgctgctg
ttgctggtcgacaagaagatctccaacattcgcgaaatgctgccggttctggaagcagtc
gccaaggctggccgtcctctgctgatcgtcgctgaagacgttgaaggcgaagcgctggca
actctggttgtcaacaacatgcgcggtatcgtgaaagttgcagctgtcaaggctccaggt
ttcggcgatcgtcgcaaggccatgctgcaggacatcgctgttctgaccggcggtaccgtt
atctccgaagagatcggcctgagcctggaaaccactaccctggaacacctgggtaatgcc
aagcgcgtcatcctgaacaaagaaaacaccaccatcatcgatggtgctggcgtcaaaacc
gatatcgactcgcgtatctcccagatccgtcagcaaatcggcgacaccagctcggactac
gacaaggaaaaactgcaagagcgtctggccaagctgtctggcggcgttgcagtgatcaag
gtcggtgccggttccgaagttgaaatgaaagagaagaaagcccgcgttgaagacgccctg
cacgcaacccgcgcagccgtcgaagaaggcgtggtacctggcggtggcgtagcactggtt
cgctccctgcaagctatcgaaggtctgaaaggcgacaacgctgatcaggacgtcggtatt
gctctgctgcgtcgcgccgttgaagcacctctgcgccagatcgttgccaactccggtgac
gagccaagcgttgttgtcgacaaggtcaagcagggttcgggtaacttcggttacaacgct
gcttccggcgaatacggcgacatgattgaaatgggtatcctggacccggccaaagtgact
cgctctgctctgcaggcggcgtcctccatcgccagcttgatgatcaccaccgaagcgatg
atcgctgacgtgcctgaagacaagccagcaggcggcggcatgccggacatgggcggcatg
ggtggtatgggcggcatgatgtaa
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