KEGG   Pseudomonas amygdali: BKM19_024070
Entry
BKM19_024070      CDS       T05354                                 
Name
(GenBank) type VI secretion system tip protein VgrG
  KO
K11904  type VI secretion system secreted protein VgrG
Organism
pamg  Pseudomonas amygdali
Pathway
pamg03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:pamg00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    BKM19_024070
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pamg02044]
    BKM19_024070
Secretion system [BR:pamg02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   BKM19_024070
SSDB
Motif
Pfam: Phage_GPD DUF2345 T6SS_Vgr Phage_base_V Gp5_trimer_C Sarcoglycan_1 DUF6484
Other DBs
NCBI-ProteinID: AVB16285
UniProt: A0AB35R5Q3
LinkDB
Position
4936130..4938691
AA seq 853 aa
MLKDLTALFAPQNRRLIKLTTVARDEQELLLESFSGTESLSELFSFKLSMISRDAGLELK
SQIGQPAQLAIELATGESRYINGYISAFSLEGSDGGLARYSATLSPWLWMLSRRVDSHIF
QEQTIEAVIRTVFAAYGALSDFEFQLSQPLKTHSYITQYRESDLTFVLRLLEHEGLFFYF
DHNQEKHTLIILDHSRDLSPLPQQPSIRYHSASVTETADSITEWRSHRRLQSGRMSIQTF
DYKQPRNQLPVGMPSLNEQGNVDAYEVYDVLDHYSHGTFKDGERLVRQRLEAIEVQGKTF
TGNSTCRAMYPGHTFELTQHFDHDRGSAEDRSFLLITVKHEGSNNYLSDESAGYKNEFVC
IRHKIPYRHPITVARPSINGQLSAIVVGPEGEEVFTDELARIQVRFHWQRGDSLPQGTTW
LRVAMPSAGSGFGHQFMPRIGQEVLVTFLAGDIDRPLATSGLYNNIHLPPRFSKASGLPG
NRTLSGIRTQEHKGSGFNELLFDDTPGSLRARMGTTHQATALNLGKLTDPRTDGTAQPRG
NGAELRTDAAIALRAAQGMLLTTYARTDAKGSQLDREELLKLLAECGELFKSLGETAAAR
GGQAVDVQGIDALRQSLNQWPAPDSNGLGDPVLAMTAAAGIASATPRSQVHYAGEHHDIT
AQNNLQLTSGAAMHLQAGKGLSAFAQDAGISAIANRGKVLVQAQEDDIALNAQKNLHVSA
VEGEVVITAPTIRLVADDGSYIKIGGGVEIGSQGKVTVHASEHDWIGPKTDSAAIPSFGR
DPAAQQVTFHYPGHSEKSPRAAADHSYEIKLEDGSLVKGMTNADGLTERVEREMMHQAQV
SALRSGTPKGGAQ
NT seq 2562 nt   +upstreamnt  +downstreamnt
atgttaaaggatctaacggcgctatttgcgccacaaaaccgtcgcttgatcaagctgacg
accgttgcccgtgacgaacaggaactcctgctggaaagtttttccggcactgaaagcctg
tccgagctgttcagtttcaagttgtcgatgattagccgcgacgccggcctggaactcaaa
tcgcagatcggccagcctgcacagctggcaatagaactcgccaccggcgaatcgcgctac
atcaatggttatatcagtgccttcagcctggaaggcagcgacggcggcctggcccgctac
agcgccacactgagcccctggctatggatgctctcgcgacgcgtcgactcgcacatattt
caggaacagaccatcgaagccgttatccgtacggtatttgcggcatacggcgcgttgtcc
gacttcgaatttcaactcagccagccactcaagacacacagttacatcacccagtaccgt
gaaagcgatctgacctttgtattgaggttgctggaacacgaaggtctgttcttctatttc
gatcacaatcaggaaaagcacacgctgatcattcttgatcactcgcgtgacctctcgccc
ctgccgcaacagccaagcattcgttatcacagcgcatccgttaccgagacagcggactcg
attaccgaatggcgcagccatcgacgcctgcaatcggggcgcatgtccattcagacattt
gactacaagcagccccgtaatcagttgcctgtcggcatgccgagcctcaatgagcagggc
aacgtcgacgcgtatgaagtgtatgacgtgctcgatcactacagtcatggcaccttcaaa
gacggtgaacgcctggtgcgtcagcgcctggaagccattgaagtacagggcaagacattc
accggcaacagtacctgccgcgccatgtaccctggccacacctttgagctgacccagcat
tttgatcatgaccgcggctctgctgaagatcgcagttttctgctgataacggtcaagcat
gagggcagcaataattacctgtcggacgaaagcgcaggctacaaaaacgagttcgtgtgc
attcgccacaagatcccctatcggcatccgatcaccgttgcgcgcccgagcattaacggc
cagctgagcgccatcgtggtcgggccggaaggtgaggaagtgttcactgacgagctggcg
cggatacaggtcaggttccattggcagcgtggcgacagcctgccgcaaggcaccacctgg
ttaagggtggcgatgcccagtgctggcagcggcttcgggcatcagttcatgccacgcatc
ggccaggaagtgctggtgacatttctggcaggcgatatcgaccggcctctggcgacgtcg
gggctctacaacaacattcatctgccaccgcgcttcagcaaggcctcggggctgccgggc
aaccgcactctgtcggggatccgcacccaggaacataaaggcagcggcttcaacgaattg
ctgttcgatgacacaccaggctcactgcgcgcgcgcatgggcacaacccatcaggccaca
gccctcaacctgggcaaactgaccgacccgcgtactgacggcaccgcccagccacgcggc
aacggcgcagaactgcgcaccgatgccgccatcgccctgcgtgccgcgcagggcatgttg
ctgaccacctatgcgcgtaccgacgcaaaaggctcacagctggatcgcgaagagctgctc
aaactgctggccgagtgcggcgagctgttcaaatccctcggcgaaaccgccgccgcgcgc
ggcggtcaggcagtggatgttcaaggcatcgacgccttgcgtcagtcgctgaatcaatgg
cccgcgccggacagcaacggcctgggcgacccggtactggccatgaccgcagcagcaggt
attgccagcgccacgccgcgctcgcaggttcactatgccggtgaacatcacgacatcacc
gcgcagaacaacctgcaattgaccagcggcgcggccatgcacctgcaagcgggcaaaggg
ctgtcagccttcgcccaggatgctgggatcagcgccatcgccaaccgcggcaaagtgctg
gtgcaggcccaggaagacgacatcgccctcaatgcccagaaaaacctgcacgtctcggcc
gtcgaaggcgaagtggtcatcaccgcgccgaccattcgcctggtcgccgatgacggcagt
tacatcaagattggcggcggcgtcgaaatcggctcgcaaggcaaagtcaccgtgcacgcc
agcgaacacgactggatcggccccaagaccgacagcgctgcgattccctctttcggccgc
gaccccgccgcccagcaggtcaccttccactaccccggccacagcgaaaaaagcccgcgg
gcagcagcggatcactcgtatgaaatcaaactggaagatggcagcctggtgaaaggaatg
acgaacgcagacggactgacggagcgcgtggaacgcgaaatgatgcatcaggcgcaagta
tcggcactacgcagcggcacaccgaaaggaggtgcgcaatga

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