Pseudomonas amygdali: BKM19_024185
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Entry
BKM19_024185 CDS
T05354
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
pamg
Pseudomonas amygdali
Pathway
pamg00470
D-Amino acid metabolism
pamg00550
Peptidoglycan biosynthesis
pamg01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pamg00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
BKM19_024185
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
BKM19_024185
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pamg01011
]
BKM19_024185
Enzymes [BR:
pamg01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
BKM19_024185
Peptidoglycan biosynthesis and degradation proteins [BR:
pamg01011
]
Precursor biosynthesis
Amino acid ligase
BKM19_024185
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Gene cluster
GFIT
Motif
Pfam:
MurD-like_N
Mur_ligase_M
Mur_ligase_C
Motif
Other DBs
NCBI-ProteinID:
AVB16307
UniProt:
A0AB35R4B8
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Position
complement(4964532..4965878)
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AA seq
448 aa
AA seq
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MSLIVSDRFRIVVGLGKSGMSLVRFLANRGVSFAVADTRENPPELATLRRDYPQVEVRCG
ELDVDFLCRADELYVSPGLALATPALQQAHARGVKLSGDIELFARYAKAPVIAITGSNAK
STVTTLVGEMAVAAGKRVAVGGNLGTPALDLLSDDVELYVMELSSFQLETIDQLNAEVAT
VLNISEDHMDRYSGLPAYHLAKHRIFRGARQVVVNRQDALSRPLIGEGLPCWTFGLNKPD
FHGFGLREENGEKYLAFQFENLMPVRELKVRGAHNQANALAALALGHAVGLPFDAMLASL
REFTGLEHRCQWLREHGGVHYYNDSKATNVGAALAAIEGLGSDIDGKLVLIAGGDGKGAD
FSALRAPVAEHCRAAVLLGRDAELIAQALGDAVPLVRVDTVQAAVEHSAKLAQRGDAVLL
SPACASLDMFKNYEERGRVFAQAVECLS
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
gtgtccctgatcgtttccgaccgcttccgcattgttgtggggcttggcaaaagtggcatg
tccctggttcgcttcctggcgaaccggggcgtgtcctttgccgtggccgacacgcgggag
aatcctcctgagctggcgaccttgcgtcgtgactatccgcaggtggaagtgcgttgtggc
gagctggatgtggatttcctctgccgtgccgacgagttgtatgtcagccccggtctggcg
ctggccacaccggccctgcagcaggcgcacgcgcgtggcgtcaagctgtccggtgacatc
gagctgttcgcgcgttacgcgaaggcaccggtcatcgccatcaccggttcgaatgcgaaa
agcaccgtgacaacgctggtaggtgaaatggccgtcgctgcaggcaaacgcgttgcggtc
gggggcaacctcggtactccggcgctggacctgctcagcgacgatgtcgaactgtacgta
atggagctgtccagctttcagctcgaaaccatcgaccagctcaatgctgaagtggcaacc
gtgctgaacatcagcgaagaccatatggaccgctacagcggcctgccggcttaccacctt
gccaagcaccggattttccgtggcgcgcggcaagtggtggtcaatcgtcaggatgccctg
tcccgtccgctgattggtgaaggcctgccttgctggacgttcggtctcaacaagcctgat
ttccacggctttggtctgcgtgaagaaaacggcgaaaaatacctggcgttccagttcgaa
aacctgatgccggtacgtgagctgaaagttcgtggtgctcacaatcaggccaacgccctt
gctgcattggcgcttgggcatgcggttggcctgccgttcgatgcgatgcttgcaagcctg
cgcgaattcaccggcctggagcatcgctgccagtggctgcgtgagcatggcggcgttcat
tactacaacgactccaaggccaccaacgtcggtgccgcactggctgccatcgaaggtctg
ggttcggatatcgacggcaagctggtgctgatcgctggcggcgatggcaaaggcgctgac
ttcagcgcattgcgtgcgccagtcgctgagcattgccgcgctgcggtgttactgggccgc
gacgccgagctgattgcccaggcattgggtgatgccgttcctctggtgcgtgtcgacacc
gtccaggctgctgtcgagcacagtgcaaagctggcgcagcggggcgatgcggtattgctt
tcgcctgcatgcgccagcctggacatgttcaagaattatgaagagcgcggacgtgtgttc
gcgcaggcagtggagtgcttgtcatga
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