Pseudomonas amygdali: BKM19_024420
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Entry
BKM19_024420 CDS
T05354
Name
(GenBank) RNase adaptor protein RapZ
KO
K06958
RNase adapter protein RapZ
Organism
pamg
Pseudomonas amygdali
Brite
KEGG Orthology (KO) [BR:
pamg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pamg03019
]
BKM19_024420
Messenger RNA biogenesis [BR:
pamg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
BKM19_024420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PapZ_C
RapZ-like_N
AAA_18
AAA_29
AAA_16
T2SSE
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AVB16351
LinkDB
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Position
5006429..5007286
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AA seq
285 aa
AA seq
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MRMIIVSGRSGSGKSTALDVLEDNGFYCVDNLPAGLLPELAERALINTELAEPLLAVSID
ARNLPSHLTRFPQMLDEVRSRNIQCDVLYLDADEATLLKRFSETRRRHPLSTADRSLAEA
IRDETTLLGPIIDLADLKINTTHLNLYQLRDALKLRLLNKPEPGTAFLIESFGFKRGMPV
DADLVFDVRCLPNPYWKPELRDHSGLEQPVIDYLSVQPDVEEMFQDIFAYLNKWLPRFAA
SNRSYVTIAIGCTGGHHRSVYLTERLGQVLQQSLKNVQVRHRDLS
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatgatcatcgtcagcggccgttccggctcgggtaaaagtacagccctcgacgtg
ctggaagacaacggtttttactgtgtcgacaacctgcctgccggactgctgccggaactg
gccgagcgagcgctgataaatactgaactggccgagcccttgctggcggtgtccatcgat
gcgcgaaacctgcccagtcacctgacccgctttccgcaaatgctggatgaagtccgctca
cgcaacatccagtgcgacgtgctttacctggatgcggatgaagcaacccttctcaaacgc
ttctcggaaaccaggcgtcgtcatcctttgagcacggcagatcgttcgctggccgaggcg
atacgcgacgagacaacgctgctgggcccgatcatcgatctggccgacctgaaaatcaac
accacccacctgaacctctatcagttgcgcgacgcactcaagcttcgcctgctgaacaag
cccgagccaggcactgcgtttctgatcgaatcctttggtttcaagcgtggcatgcccgtc
gacgcagatctggtattcgatgtgcgctgcctgcccaacccgtactggaagcctgaactg
cgcgaccattccgggcttgaacaaccggttatcgactacctgtcggtgcaacccgatgtt
gaagagatgtttcaggacatcttcgcttatctgaacaaatggttgccccggtttgcagcc
agcaaccgttcttacgttaccattgccatcggctgcaccggcggacatcaccgctccgtc
tacctgaccgaacggctcggccaggtcttgcaacaatcactcaagaacgttcaggttcgc
caccgcgaccttagctga
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