Pseudomonas amygdali: BKM19_025160
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Entry
BKM19_025160 CDS
T05354
Name
(GenBank) PAS domain S-box protein
Organism
pamg
Pseudomonas amygdali
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_9
PAS
PAS_4
PAS_3
PAS_8
Ly49
Motif
Other DBs
NCBI-ProteinID:
AVB16482
UniProt:
A0AB35R0S6
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Position
5160663..5164499
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AA seq
1278 aa
AA seq
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MPTSTPLPSSSVATDSATRPLRGSVKGILAALVLVVLALLFWQLIEQFHQTQERQRQRSL
EYSIQLSDRMSLNMALKAQIAMNLLDEAQSSGDRLEQPTALASLRTALPALRSAARLNPT
GDIVGDSAEASRDGEFLRQAMKKAQGHPYFYTGTEDVKQIYILIRQGGGVSGDYWALRMA
PDALKDLASQPAQDFQHIWRLEQRKTQRVLLREPAPSNEADSGLSDTVLLQPLSNSDWQL
RGLFDTYKARSELLAPLIGKCLIGLLLSILPLIALMSLRKRQRQMLQSRRRYRDIFEGAG
VAICVMDMSGLQEQLEALEVRTDEDFELLLKSQPASLKRLLQQLRINELNEVALGLLEIE
HSEQAWQPLIEGESRSRPGIGVQVIQAVLAGLPRLELEICLTRASGQDQHLWLVMRLPES
RSDFDAVILSIGDITSRKQIELSLLDRESFWSDVVRTVPDHLYVQDVLSQRVIYSNHHFG
YTLGYSKSELRAMGEFFWEILLHPDDARSYQDMRLRQRHHGHNELLQCVLRFRDRENNWR
CFDVREQALAWDAENLVTRIIGIAKDITEQVASSQSLRDSEQRYRMLAESISDVIFSTDG
QLAVNYVSPSVERALGYSAEWILQNGWSAAIANPQQVIGFDALISRIGKVLHKPQELARL
REEVTTRMFLFDCLRADGRKIPVELRVVLVWDENGNFEGIFGVGRDISQQRRAEKDLRMA
ATVFEHSTSAILITDPAGYIVQANEAFTRVSGYEVAQVLDQLPGMLTVESEQENHLRYIL
KQLNGQGTWEGEIRLKRRNGEHYPAWVGITAVLDDEGDLASYVCFFSDISERKASEDRIH
RLAYYDALTHLPNRTLFQDRLHSALQHAERQQAWVVLMFLDLDRFKPINDSLGHAAGDRM
LQEMATRLLACVSSDDTVARMGGDEFTLLLQPDTSREAALTRAIHVAERILTSLVTPFVL
EGREFFVTASIGIALSPQDGKELSQLMKNADTAMYHAKERGKNNFQFYQADMNATALERL
ELESDLRHALEQQEFTLYYQPQFSGDGKRLTGAEALLRWRHPRRGLVPPNDFIPVLEELG
LVVEVGDWVLTEACRQLKHWHQAKVRVPKVSVNISARQFSDGQLGKRIAHILEQTGLSPA
CLELELTESILMREVNEAMQILDGLKNLGLSIAVDDFGTGYSSLNYLKQFPIDVLKIDRT
FVDGLPSGEQDAQIARAIIAMAHSLNLSVIAEGVETHEQLEFLREHDCDEVQGYLFGRPM
PASQFEAQFSNDALFMLD
NT seq
3837 nt
NT seq
+upstream
nt +downstream
nt
ttgcccacttcaacgcctctgccgtcatccagtgtcgctacagacagtgcgaccaggcct
ttgcgcggctcagtgaaaggtatattggccgcgctggtgttggtggtgcttgcactgctg
ttctggcaattgatcgagcagtttcatcagactcaggaacgccagcgtcagcgcagcctg
gagtacagcatccagctttccgaccggatgagtctgaacatggcactcaaggcgcaaatc
gccatgaacctgctggacgaggcgcaatcctccggagaccggctggagcagccgacggca
ctggcaagcctccgtactgccctgcccgcgctgcgcagcgccgcgcggctgaacccgacg
ggtgacattgtcggtgacagcgccgaggcatcccgcgacggagagtttctccgacaggcc
atgaaaaaggcccaaggccacccctatttctacaccggcaccgaagacgtcaaacagatt
tatatactgattcgccaaggcggtggcgttagcggcgattactgggcgctacgcatggca
cccgacgccttgaaggacctggcaagccagccagctcaggactttcaacatatctggcgc
ctggagcaacgcaagacccagcgggttctcctccgtgaaccggcgccctccaacgaggcg
gacagcggtctttccgataccgttctgcttcagccactgagtaacagcgactggcaactg
cgtggcctgttcgatacctacaaggcccgcagcgagctgcttgcgcctctgatcggcaag
tgtctgatcggcctgctgctgtcgatcctgccattgatcgcgctgatgagcctgcgcaaa
cgccagcgccagatgctgcaaagccgccgccgctatcgcgatatcttcgagggtgcgggc
gttgcgatctgcgtcatggacatgtcgggtctgcaagagcaactggaagcactcgaagtc
agaacggacgaagacttcgaacttctgctcaaaagccagccagcctcgctgaaaagactg
ttgcagcagttgcgaatcaacgaactcaacgaagttgccctgggcctgctggaaatcgaa
cacagtgaacaggcgtggcagccgttgatcgagggcgaatcgcgctcgcgccccggcatc
ggcgttcaggttattcaggctgttctcgccgggctgcccaggctggaactggaaatatgc
ctgacacgcgcgagcggccaggaccagcatctatggctggtcatgcgcctgcccgagtca
cgtagcgacttcgatgccgttattctcagcatcggcgatatcaccagccgcaaacagatc
gagctgtccttgctggaccgcgagagcttttggtccgacgtggtgcgaaccgtgccggac
cacctgtacgttcaggacgtactcagccagcgagtgatctacagcaaccaccatttcggc
tacacgctgggctacagcaaatccgagctgcgcgccatgggcgagttcttctgggaaatc
ctgctgcaccccgacgacgccagaagctatcaggacatgcgcctgcgccagcgccatcac
ggccataacgagttattgcaatgcgtgctgcgctttcgggatcgcgagaacaactggcgc
tgcttcgatgtgcgcgaacaggcgctggcctgggacgcagaaaacctggtcacccgcatc
atcggcatcgccaaggacattaccgagcaggtcgcgtccagccagtcgctgcgtgacagc
gaacagcgttaccggatgctcgctgaaagcatcagcgatgtgatcttttccacggatggc
cagttggcagtcaattacgtcagcccctcggtggaacgcgcactgggatacagcgccgag
tggattctccagaacggctggtccgccgccattgccaaccctcaacaagtgatcggtttc
gatgcgctcatcagccgcatcggcaaggtgctgcacaaacctcaggaactcgccagattg
cgcgaagaggtgacgaccagaatgtttctgttcgactgcctgcgtgcagacggtcgcaag
atcccggtggaattgcgggtggttctggtgtgggacgaaaacggcaatttcgagggcatc
ttcggggtcggccgggacatcagccagcagcgtcgggcagaaaaagacctgcgcatggcc
gccaccgtatttgaacactcgacatcggcgatcctcattaccgaccctgccggctatatc
gttcaggccaacgaggcgttcacccgcgtcagcggctatgaagttgcccaggtgctcgac
cagctaccgggcatgctcacggtggaatcggaacaggaaaaccacctgcgctacatcctc
aaacaattgaacggccaaggcacctgggaaggtgaaatcaggctcaagcgccgtaacggc
gaacactacccggcctgggtcggcattaccgcagtgctcgacgatgaaggcgatctggcg
agttatgtgtgctttttcagcgatatcagcgagcgcaaggccagtgaagaccgtatccac
cgtctggcctactacgacgccctgactcacctgcccaatcgcaccctgtttcaggaccgc
ctgcattcggcgctgcaacacgccgagcgccaacaggcctgggtggtgctgatgtttctc
gacctggaccgcttcaaaccgatcaatgactctctgggccatgccgctggcgaccggatg
cttcaggaaatggccacgcggctactcgcctgcgtgtcttccgatgacaccgtggcgcgt
atgggcggggatgagttcaccctgttgctgcagccggacacctcgcgcgaagccgcactg
actcgcgccattcacgtggccgagcggattctgaccagtctggtaacgccgtttgtgctt
gaaggccgcgagttctttgtcactgccagcatcggcatcgcactcagtccgcaggacggc
aaggaactgagccagttgatgaagaacgccgacacggcgatgtaccacgccaaagaacgt
ggcaagaacaacttccagttctatcaggcggacatgaacgcgaccgctctggagcgtctg
gagctggaaagcgacttgcggcacgccctggaacagcaggagttcaccctctattaccag
ccgcagttcagtggtgacggcaaacgcctgacgggcgcggaggccctgctgcgctggcgc
catccacgtcgagggctggtgccgccgaacgacttcatcccggtgctcgaagagcttggg
ctggtggtggaagtcggcgactgggtgctcaccgaagcctgtcgccagctcaagcactgg
catcaggcgaaagttcgcgtacccaaagtgtcggtgaacatctcggcgcggcaattctcg
gacggccagctgggtaaacgcatcgcccacatactggagcagacgggcctgtcgcctgcc
tgtcttgagctggaactgaccgaaagcatcctgatgcgcgaggtcaacgaagccatgcag
atcctcgacggcctcaaaaaccttggcctgagtatcgctgtcgatgacttcggcacaggc
tactcgtcgctgaattacctcaaacagttcccgatcgacgtactgaagatcgaccgcacc
ttcgtcgacggccttccgtcgggcgaacaggacgcccagatcgctcgcgccatcatcgcc
atggcccacagcctgaacctctcggtcatcgccgaaggcgtagaaacccacgagcaactg
gagtttcttcgcgaacacgactgcgacgaagtccagggctacctgttcggccgcccgatg
ccagcaagccagttcgaagcgcaattcagcaatgatgcgctgttcatgctggattga
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