Pseudomonas amygdali: BKM19_025455
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Entry
BKM19_025455 CDS
T05354
Name
(GenBank) pseudouridine synthase
KO
K06181
23S rRNA pseudouridine2457 synthase [EC:
5.4.99.20
]
Organism
pamg
Pseudomonas amygdali
Brite
KEGG Orthology (KO) [BR:
pamg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pamg03009
]
BKM19_025455
Enzymes [BR:
pamg01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.20 23S rRNA pseudouridine2457 synthase
BKM19_025455
Ribosome biogenesis [BR:
pamg03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
BKM19_025455
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
AVB16533
UniProt:
A0AB35QXJ3
LinkDB
All DBs
Position
complement(5220999..5221631)
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AA seq
210 aa
AA seq
DB search
MSRTQRPVSRRPASNPAGAARRVAKAPPAEPKLFLFNKPFDVLTQFSDEGGRATLKDFIK
IPGIYPAGRLDRDSEGLLLLTNDGQLQARIADPKHKLAKTYWVQVEGEPTDEQLQQLRDG
VQLNDGPTLPAEARQLDEPQLWPRNPPVRFRKSVPTSWLELVIKEGRNRQVRRMTAAVGL
PTLRLVRFRIGDWTLDGLDQGQYREVAAKL
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgcacccaacgccccgtttcccgccgtcctgcctccaacccggcaggcgctgcc
cggcgtgtcgccaaagcgccaccggccgagccgaagctgttcctcttcaacaagccattc
gatgtgctgactcaattcagtgacgaaggagggcgcgccacgctcaaggacttcatcaag
atccccggcatttatccggccggacgactggatcgcgacagtgaaggcttgttgctgctg
accaacgacggccagttgcaggcgcgcatcgccgacccgaaacacaaactggccaagacc
tactgggtgcaggtcgagggtgagccgaccgatgagcagttgcagcagttgcgcgacggt
gtccagctcaacgacggcccgaccttgcccgccgaggcgcggcagctcgatgaaccgcaa
ctgtggccgcgcaacccgcctgtgcgctttcgtaagagcgtgccgaccagctggctggaa
ctggtgatcaaggaagggcgtaatcggcaggtgcggcgcatgactgctgccgtcgggttg
ccgaccctgcggctggtgcggttcagaattggcgactggacgctggatgggctggatcag
ggccaataccgggaagtcgccgcaaagctgtga
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