Pseudomonas amygdali: BKM19_025500
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Entry
BKM19_025500 CDS
T05354
Name
(GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
pamg
Pseudomonas amygdali
Brite
KEGG Orthology (KO) [BR:
pamg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pamg03016
]
BKM19_025500
Enzymes [BR:
pamg01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
BKM19_025500
Transfer RNA biogenesis [BR:
pamg03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
BKM19_025500
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GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
B12-binding
LuxC
HTH_39
Fer4_12
Motif
Other DBs
NCBI-ProteinID:
AVB16542
UniProt:
A0AB35QXC9
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All DBs
Position
5231697..5233025
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AA seq
442 aa
AA seq
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MAKKLYIETHGCQMNEYDSSRMVDLLGEHQALEVTARAEDADVILLNTCSIRERAQDRVY
SQLGRWRELKLANPEMVIAVGGCVASQEGAAIRDRAPYVDVVFGPQTLHRLPEMIDAARI
TRLPQVDVSFPEIEKFDHLPEPRVDGPSAYVSVMEGCSKYCTFCVVPYTRGEEVSRPFDD
VLSEVIHLAENGVREVTLLGQNVNGYRGTTHDGRVADLADLIRVVAAVDGIDRIRYTTSH
PLEFSDSLIQAHAEVPELVKHLHLPVQSGSDRILAAMKRNHTTLEYKSRLRKLRAAVPGI
SISSDFIVGFPGETEKDFDNTMKLIEDVGFDFSFSFVYSPRPGTPAADLKDDTPEALKKE
RLAALQHRLNQQGFEISRQMVGSIQRILVTDYSKKDPGELQGRTENNRIVNFRCNNPKLI
GQFADVHIDDAQPHSLRGSLLQ
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atggccaagaagctttatatcgaaacccacggttgccagatgaacgagtacgacagctcg
cgcatggtcgatctgctgggcgaacatcaggccctggaagtcaccgctcgcgcggaagac
gccgacgtgatcctgctcaatacctgctcgattcgcgagcgcgcccaggaccgggtgtac
tcccagcttggccgctggcgtgaattgaagctggccaatcccgagatggtgatcgctgtc
ggtggctgcgtagccagccaggaaggcgcagccattcgtgatcgcgcgccctatgtggac
gtggtgttcggcccccagaccctgcaccgcctgccggaaatgatcgacgcagcgcgtatc
acccgcttgccgcaggtcgatgtctcgttcccggaaatcgaaaaattcgaccatttgcca
gagccgcgcgtagatggcccgagcgcttatgtgtcggtgatggaaggctgcagcaaatac
tgcacgttctgcgtggtgccctatacccgtggcgaggaagtcagccggccgtttgacgat
gttctgagcgaagtcatccacctcgccgaaaacggcgtgcgtgaagtcaccctgctgggg
cagaacgtcaacggctatcgcggaaccacccacgacgggcgggttgcagatctggcggac
ctgatccgcgtggttgccgcggtcgatggcatcgaccgcattcgctacaccacctcgcac
ccgctggagttttccgacagcctgattcaggcccatgcggaggtgccggagctggtcaaa
cacctgcacttgccggtgcagtcgggttccgaccgcattctggcggccatgaagcgcaac
cacaccacgctggaatacaagtcccgcttgcgcaagctcagggcggccgtgccgggcatc
agtatcagttccgacttcatcgttggcttccccggcgagaccgaaaaagatttcgacaac
accatgaagctgattgaagacgtgggtttcgacttctcgttctcgttcgtctacagcccg
cgcccgggtacgcctgccgcagatctgaaagacgacacgccagaagcgctcaagaaagag
cgcctggccgcgctgcaacaccgcctgaaccagcagggtttcgagatcagccggcagatg
gtgggcagcatccagcgcattctggtaaccgactattcgaagaaagaccctggcgaactg
cagggccgcaccgagaacaaccggattgtgaattttcgctgcaacaatccgaaactgatc
gggcagtttgccgacgtacacattgatgatgcgcagcctcactctctgcgtggctcgctg
ctacagtaa
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