Pseudomonas amygdali: BKM19_025545
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Entry
BKM19_025545 CDS
T05354
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
pamg
Pseudomonas amygdali
Pathway
pamg03030
DNA replication
pamg03430
Mismatch repair
pamg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pamg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BKM19_025545
03430 Mismatch repair
BKM19_025545
03440 Homologous recombination
BKM19_025545
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pamg03032
]
BKM19_025545
03400 DNA repair and recombination proteins [BR:
pamg03400
]
BKM19_025545
Enzymes [BR:
pamg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BKM19_025545
DNA replication proteins [BR:
pamg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BKM19_025545
DNA repair and recombination proteins [BR:
pamg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BKM19_025545
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delt_C
DNA_pol3_delta_C
HP_1247_M
DNA_pol3_gamma3
CCCAP
Motif
Other DBs
NCBI-ProteinID:
AVB16551
UniProt:
A0AB35R157
LinkDB
All DBs
Position
5242024..5243061
Genome browser
AA seq
345 aa
AA seq
DB search
MKLAPAQLGKHLQSTLAPVYVISGDDPLLCQEAADAIRAAARQQGFDERQVFSADASFDW
GTLLQAGASMSLFAERRLLELRLPSGKPGDKGAAALMEYCARPAEDTLLLISLPKLDGSA
QKTKWGKALVEGAQTQFVQIWPVDVGQLPQWIRQRLSQAGLAATQDAVELIAARVEGNLL
AAAQEIEKLKLMAEEGQITVETVQAAVADSARFDVFGLTDAVLNGEAAHALRMLEGLRGE
GVETPVILWALTRELRALANMSQQFSQGVPLDKVFSSARPPIWDKRKPLMSKALQRHSAK
RWSQLLMDAQRIDAQIKGQAPGSPWSSLSRLALLMAGQRLALPAE
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgaaactcgcccccgcccaactcggcaagcacttgcaaagcacacttgcgcccgtctat
gtgatcagcggtgacgatccgctgctctgtcaggaagcggctgacgccattcgcgcggcc
gcacgccagcagggcttcgatgagcggcaggtattcagcgctgacgccagcttcgactgg
ggtacgctgctccaagctggcgccagcatgtcgctgttcgccgagcgccgtcttctggaa
ctgcgcttgccctcaggcaaacccggtgacaaaggcgctgcggcgctcatggaatattgc
gccagacctgccgaagacaccctgctgctgatcagcctgcccaaactcgatggcagtgcg
cagaaaaccaaatggggcaaggcactggttgagggtgcgcaaacccagttcgtgcaaatc
tggccggtggacgtcggccagctgccgcaatggattcgccagcgcctgtcgcaggcgggc
ctggcagcgactcaggacgccgtcgaactgatcgcggcccgggtcgaaggcaacctgctg
gccgccgcgcaggaaatcgaaaagctcaagttgatggccgaagaaggccagatcaccgtc
gagactgtgcaggcggcggtggccgacagtgcacgcttcgacgtatttggcctgaccgat
gcagtgctcaatggcgaagcagcccatgcgttgcgcatgctggaaggcctgcgcggcgaa
ggggtcgaaacccccgtgatcctctgggccctgacccgcgagctgcgcgcgctggccaac
atgtcccagcagttcagtcagggcgtgccactcgacaaagtgttcagctcggcccgcccg
ccgatctgggacaagcgcaagccactgatgagcaaagccctgcaacgccattcggcaaaa
cgctggagccagttgctgatggacgcacagcgcatcgacgcacagatcaaggggcaggcg
ccaggctcgccgtggagcagcctcagccgactggcgctattgatggcaggtcaacggctg
gcactgcctgcggagtga
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