Pseudomonas amygdali: BKM19_025560
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Entry
BKM19_025560 CDS
T05354
Name
(GenBank) lytic murein transglycosylase
KO
K08305
peptidoglycan lytic transglycosylase B [EC:
4.2.2.29
]
Organism
pamg
Pseudomonas amygdali
Brite
KEGG Orthology (KO) [BR:
pamg00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pamg01011
]
BKM19_025560
Enzymes [BR:
pamg01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
BKM19_025560
Peptidoglycan biosynthesis and degradation proteins [BR:
pamg01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
BKM19_025560
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Motif
Pfam:
SLT_2
PG_binding_1
PG_binding_3
Motif
Other DBs
NCBI-ProteinID:
AVB16554
UniProt:
A0AB35R435
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All DBs
Position
5243797..5245134
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AA seq
445 aa
AA seq
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MPSRFTHRPQLRQLIAASSLVALVACAEKPTAADATPLQSSKAQTNAPAVAPTPALVVDD
SLTIQPAVSFSEWQAGFRVQALKAGIRADVFDQAFAGVTPDMSVVKADRSQPEFTRPIWE
YLDGAISAARVRKGQALLSQYADDLQKIEQQYGVDRQALVAVWGMESNFGSFQGTQSVIR
SLATLAYEGRRPGFAQSQLLAALEIIQHGDITPDKMLGSWAGAMGQTQFIPTTYNTHAVD
FDGDGRRDIWNTPADALASTAHYLQSSGWQRGQPWGFEVVLGSGFDYSLADSTTRKSLAE
WQQLGLKQPDGSAIPVAASQQQAVLLLPAGYRGPAFLVLDNFRAILKYNNSTSYALAISL
LSDRFKGAGYVVGAWPRGDTPLSRSERIELQTLLSARQYDAGAPDGIIGANTRKAIRSAQ
QSFGWPADGYPTHELLEALRKPVGQ
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgccttctcgttttacccatcgcccgcagctgcgccaactcatcgctgcctccagcctt
gttgccttggtagcctgcgcagaaaaacccactgcagccgatgccacgcctcttcaatcc
agcaaagcacagacaaacgctcctgccgtagcccctacgcctgcgctggtcgttgatgac
agcctcacgattcaacccgccgtcagcttcagcgaatggcaggccggttttcgtgttcag
gcgttaaaggcaggtatccgggcggatgtattcgatcaggcattcgccggtgtcactccc
gacatgagcgtggtcaaggccgaccgcagccagcctgagttcacccgtccgatctgggaa
tatctggacggtgccatctccgccgcacgcgtgcgcaaggggcaggcgctgctttcgcag
tacgctgacgacctgcagaagatcgagcagcagtatggtgtggatcgtcaggcgctggtc
gcggtatggggcatggaaagtaatttcgggtcgttccagggcacgcaatccgtcattcgc
tcgctggctacgctggcctatgaaggtcgccgtcccggttttgcacagagccagttgctg
gccgcgctggaaatcatccagcatggcgacatcacaccggacaagatgctgggttcgtgg
gccggtgcgatgggccagacccagttcatcccgaccacctataacactcatgccgtcgac
tttgatggcgatggccgccgtgacatctggaacactcccgccgatgccctggcctccact
gcgcattacctgcaaagctctggctggcaacgcggtcagccctgggggtttgaagtggta
ctcggctccgggtttgattactcgctggcagattcgaccactcgcaagagcctcgctgaa
tggcaacaattgggcctgaaacaaccggacggctcggcgattccagtcgcagccagccag
cagcaagccgtcttgttgttgccagccggttatcgcgggccagcctttctggtgctggat
aacttccgagccattctcaagtacaacaactccacctcgtacgcactggcgatcagcctg
ctttctgaccggttcaaaggggccgggtacgtagtaggtgcatggccacgcggggacact
ccgctgagccgctctgaacgcattgaactgcaaaccctgctctcggcacgtcaatatgac
gcaggcgcaccagacggcattatcggtgccaatacgcgtaaggccattcgtagcgcgcag
cagtcattcggctggccggcagatggttacccgacgcatgaattgctggaggccctgcgc
aagcctgtggggcaataa
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