Pseudomonas amygdali: BKM19_026865
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Entry
BKM19_026865 CDS
T05354
Name
(GenBank) spermidine/putrescine ABC transporter substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
pamg
Pseudomonas amygdali
Pathway
pamg02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pamg00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
BKM19_026865
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pamg02000
]
BKM19_026865
Transporters [BR:
pamg02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
BKM19_026865
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
SBP_bac_6
SBP_bac_11
Motif
Other DBs
NCBI-ProteinID:
AVB16785
UniProt:
A0AB35R878
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All DBs
Position
complement(5487180..5488214)
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AA seq
344 aa
AA seq
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MLKSLKFTAITLGLMCAAQAMAATDLTVISFGGANKAAQEKAFYAPWEKAGNGKIIAGEY
NGEMAKVKTMVDTKSVSWDLVEVESPELARGCDEDMFEELDPKQLGNAADFVPGAITTCG
AGFFVWSTVLAYNADKVATAPNGWADFWDTKKFPGKRGLRKGAKYTLEFALMADGVAPKD
VYKVLASKDGQDRAFKKLDELKPNIQWWEAGAQPPQYLASGDVVMSSAYNGRIAAVQKES
NLKVVWTGGVYDFDAWAIPKGSKNADAAKKFIAYMLSPEQQKTYSQNIAYGPANTQAVKL
LDKETLQNMPTTPENIKDQVQMDVAFWTDNGESLEQRFTAWAAK
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgttgaagtctttgaagttcaccgccatcacgttggggctgatgtgcgccgcgcaggcc
atggcagccaccgacctgaccgtcatctcctttggcggtgccaacaaggccgctcaggaa
aaggcgttctacgcgccgtgggaaaaggccggtaacggcaagatcatcgccggtgaatac
aacggtgaaatggccaaggtcaaaaccatggtcgacaccaagagcgtttcctgggacctg
gtagaagtcgaatcgccggaactggcccgtggttgcgatgaggacatgtttgaggagctg
gacccgaaacaactgggcaatgccgctgatttcgtgcctggcgccatcaccacctgcggt
gccggtttcttcgtctggtccaccgtgctggcctacaacgccgacaaggtcgccacagct
ccaaacggctgggccgatttctgggacaccaagaaattcccaggcaagcgcggtctgcgt
aaaggtgccaagtacaccctggaattcgccctgatggctgacggcgttgcgccgaaagac
gtttataaagtgctggccagcaaagacggccaggaccgcgcgttcaagaaactcgatgaa
ctcaagccaaacattcagtggtgggaagcaggcgcacagccgccgcagtacctcgcttcc
ggtgacgtggtgatgagctcggcctacaacggccggatcgctgctgtgcagaaggaaagc
aacctcaaggtcgtgtggaccggcggcgtatatgacttcgatgcctgggccatcccgaag
ggctcgaaaaacgccgatgccgcgaagaagttcatcgcctacatgctgagccccgagcag
cagaagacctattcgcagaatatcgcctacggcccggccaatacccaggcggtcaagctg
ctggacaaggaaaccttgcagaacatgccgaccacgcctgagaacatcaaggatcaggtg
cagatggacgtagcgttctggaccgacaacggcgaatcccttgagcagcgtttcactgcc
tgggctgccaagtaa
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