Pseudomonas amygdali: BKM19_026870
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Entry
BKM19_026870 CDS
T05354
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
pamg
Pseudomonas amygdali
Pathway
pamg02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pamg00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
BKM19_026870
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pamg02000
]
BKM19_026870
Transporters [BR:
pamg02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
BKM19_026870
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
TOBE_2
SMC_N
AAA_25
nSTAND_NTPase5
nSTAND3
AAA_22
FeoB_N
Rad17
AAA_29
Motif
Other DBs
NCBI-ProteinID:
AVB16786
UniProt:
A0AB35R7R3
LinkDB
All DBs
Position
complement(5488297..5489421)
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AA seq
374 aa
AA seq
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MSDVDTSAGANDVLVSFRGVQKSYDGEALIVKDLNLDIRKGEFLTLLGPSGSGKTTSLMM
LAGFETPTAGEILLGGRAINNVPPHKRDIGMVFQNYALFPHMTVAENLAFPLSVRGMSKT
DVGEKVKKALGMVQLDTFAHRYPAQLSGGQQQRVALARALVFEPQLVLMDEPLGALDKQL
REHMQMEIKHLHQRLGVTVVYVTHDQGEALTMSDRVAVFHQGEIQQIAPPRSLYEEPKNT
FVANFIGENNRLNGRLVSQDGDRCVVELERGEKVHALAINVGQPGGPVTLSIRPERINLN
GRSENCANRFSGRVAEFIYLGDHVRVRLEVAGKNDFFVKQPIAELDPTLSVGDVVPIGWQ
VEHVRALDPLQQVH
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacgtcgatacaagcgctggagcaaatgatgttctggtcagctttcgtggtgtg
cagaagagctacgacggcgaagcactgatcgtcaaagaccttaacctggatattcgcaag
ggtgagttcctgacgctgctcggtccgtccggctcgggcaagaccaccagcctgatgatg
ctggccggtttcgaaaccccgactgccggcgaaattcttctcggcgggcgcgctatcaac
aatgtgccgccgcacaagcgcgatatcggcatggtgttccagaactacgcattgtttcca
cacatgacggtggccgagaacctggcgttcccgttgtcggtgcgtggcatgagcaagacc
gatgttggcgagaaagtgaaaaaggcgctgggcatggtccagctggacacctttgcacat
cgttacccggcgcagttgtccggcggtcagcagcagcgtgtggcgctggcgcgtgcgctg
gtgttcgaaccgcaactggtgctgatggacgaaccgctcggcgcgctcgacaagcaactg
cgcgagcacatgcagatggagatcaaacatctgcatcagcgtctgggtgtgaccgtggtc
tacgtgacccacgatcagggtgaagccctgaccatgtccgaccgggtcgccgtcttccat
cagggcgagatccagcagatcgcaccgccacgcagcctgtacgaagagccgaagaacacc
tttgtggccaatttcattggcgaaaacaaccggctgaacggacgtctggtcagtcaggat
ggcgaccgctgtgtcgtcgagcttgagcgcggcgaaaaagtacatgcgctggcgatcaac
gtcggccagcctggcggcccggtgaccctgtcgatccgccctgagcgcatcaacctcaac
ggtcgcagcgagaattgtgcaaaccgtttttccggccgcgtggccgagttcatctacctg
ggcgaccacgttcgcgtgcgtctggaggtagccggcaagaacgacttcttcgtcaaacag
ccgattgctgaactggacccgacgctcagcgtgggcgatgtcgtgccgatcggctggcaa
gtcgagcacgttcgcgcgctcgaccccttgcagcaagtgcattga
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