Pseudomonas amygdali: BKM19_027230
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Entry
BKM19_027230 CDS
T05354
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
pamg
Pseudomonas amygdali
Pathway
pamg02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pamg00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
BKM19_027230
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pamg02000
]
BKM19_027230
Transporters [BR:
pamg02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
BKM19_027230
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
TOBE_2
AAA_22
SMC_N
Rad17
AAA
AAA_16
SbcC_Walker_B
AAA_14
AAA_28
nSTAND_NTPase5
NACHT
ATP-synt_ab
Rcc01698_C
ATPase_2
AAA_23
ORC-CDC6-like
Motif
Other DBs
NCBI-ProteinID:
AVB16845
UniProt:
A0AB35QYK2
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Position
complement(5567780..5568811)
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AA seq
343 aa
AA seq
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MSGTTIRLKGCRKAFADGTVAVQDLHLTIEPGETLAILGPSGCGKTTTLRLIAGLERPDV
GQVLFDDQDVTRLPIERRDVGMVFQNYALFPNLDVAGNIVYGLKIRGLSPAERSKRCDEL
LELVGLTGHGNRRVNELSGGQRQRVALARALAPRPRVLLLDEPLAALDAQLRERLRSELD
QLLRGLGITSVFVTHDQGEAMALGDRILVMEKGCVSQLATPREIYQQPANAFVAGFVGNL
NAFSVVERTPSGLKVSGGELPWNGADLPGTVYCRPEHLRLMPERGHLQGRLVGQFFQGAQ
SRLLVDVGGPQPLLVDSTDNVIHAANAAIALSVEPQALFTLHS
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgagcggaactaccattcgcctgaaaggctgccgcaaggcatttgccgacggcaccgtt
gctgtacaggatctgcacttgaccatcgagcctggcgaaacgctggcgattctcggtccg
tccggttgcggcaagaccaccaccttgcgtctgatcgccgggcttgagcgtccggacgtc
ggtcaggtgttgttcgatgatcaggacgtgacacgtctgcccatcgagcggcgcgacgtg
ggcatggtgtttcagaactatgcgctgttcccgaatctcgacgtcgccgggaacattgtt
tacggcctgaagattcgcggcctgtcgcctgccgaacgaagcaagcgttgcgatgagttg
ctggaactggttggcctgaccggtcatggcaatcgtcgtgtcaacgagctttctggtggt
cagcgtcaacgggtcgcgctggccagggctctggcaccgcgtccgcgggtgctgctgctc
gacgagccgctggcggcactggatgcgcagttgcgtgagcgcttgcgcagcgagctcgat
cagttgttgcgtgggttgggcatcacctcggtgttcgtcacccacgatcagggcgaagcc
atggccctgggcgaccggattctggtcatggaaaaaggctgcgtctcgcaattggcgacg
cccagggaaatctatcaacaacctgccaatgcgttcgtcgccgggtttgtcggcaatctg
aatgcgttcagcgtggtcgagcgcaccccgtcaggcctcaaggtgagcggcggcgagctg
ccgtggaacggcgctgatctgccgggcacggtctactgccgcccggaacatctgcgcctg
atgccggagcgcgggcaccttcagggtcgcctggtcgggcagttttttcagggtgcgcaa
agtcgtttgctggtcgatgtcggaggtccgcagccgctgttggtggacagcaccgacaac
gttattcacgccgccaacgctgccatcgccctgagtgttgagccgcaggcgctgttcacc
ctgcattcgtaa
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