Pseudomonas amygdali: BKM19_027525
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Entry
BKM19_027525 CDS
T05354
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
pamg
Pseudomonas amygdali
Brite
KEGG Orthology (KO) [BR:
pamg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pamg03021
]
BKM19_027525 (rpoH)
Transcription machinery [BR:
pamg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BKM19_027525 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
UCR_14kD
ImpA_N
IF2_N
SANT_DAMP1_like
Motif
Other DBs
NCBI-ProteinID:
AVB16893
LinkDB
All DBs
Position
complement(5624091..5624945)
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AA seq
284 aa
AA seq
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MTTSLQPAYALVPGANLEAYVHTVNSIPLLTPEQERELAESLYYEQDLDAARQMVLAHLR
FVVHIARSYSGYGLAQADLIQEGNVGLMKAVKRFNPEMGVRLVSFAVHWIKAEIHEFILR
NWRIVKVATTKAQRKLFFNLRSQKKRLAWLNNDEVHRVAESLGVEPREVREMESRLTGHD
MAFDPAAEADDDSAFQSPANYLEDHRYDPARQLEDSDWTDNSTANLHQALDVLDERSRDI
LYQRWLAEEKATLHDLAQKYNVSAERIRQLEKSAMNKLKTSIAA
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgaccacttctttgcaacctgcttatgctttagtcccgggtgcgaaccttgaggcctat
gtgcacacggtcaacagcattcccttgctgacgcccgagcaggagcgtgaactggctgaa
agtctctactatgagcaggatctggacgcggcccgacaaatggtcctcgcccacctgcgc
tttgtcgtgcacatcgctcgcagttattcgggttacggtctggctcaggctgacctgatt
caggaaggtaacgttggtctgatgaaggccgtgaagcgtttcaaccccgaaatgggcgtg
cgtctggtgtcctttgccgtgcactggatcaaggccgaaattcacgagttcatcctgcgt
aactggcgcatcgtcaaggtcgccaccaccaaggcgcagcgcaagctgttcttcaacctg
cgcagccagaagaagcgtctggcctggctgaacaacgacgaggtgcatcgcgtcgctgaa
agccttggcgtcgagccgcgtgaagtccgtgaaatggaaagtcgtctgacgggccatgac
atggcctttgacccggcagccgaagcggatgacgacagtgcgtttcagtcaccagccaat
tatctggaagaccaccgttacgacccggcgcgtcaactggaagactccgactggactgac
aattccaccgccaacttgcatcaggcgctggacgtgctggacgaacgcagccgcgacatc
ctctaccagcgctggctggcagaagaaaaagccacgctgcacgacctggcgcagaagtac
aacgtctccgccgagcgtattcgtcagctggaaaaaagcgcgatgaacaagctcaagacg
tcgatagctgcgtaa
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