Pseudomonas amygdali: BKM19_028000
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Entry
BKM19_028000 CDS
T05354
Name
(GenBank) LacI family DNA-binding transcriptional regulator
KO
K06145
LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
Organism
pamg
Pseudomonas amygdali
Brite
KEGG Orthology (KO) [BR:
pamg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pamg03000
]
BKM19_028000
Transcription factors [BR:
pamg03000
]
Prokaryotic type
Helix-turn-helix
LacI family
BKM19_028000
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
TetR_N
HTH_31
HTH_3
DNA_pol_lambd_f
HTH_7
HTH_Tnp_ISL3
Motif
Other DBs
NCBI-ProteinID:
AVB16979
UniProt:
A0AB35QXZ4
LinkDB
All DBs
Position
5732531..5733577
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AA seq
348 aa
AA seq
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MADEKPATRKRRGAGRVTITAVAREAGVSAITVSRYFNQPEQVSPELRERIAAVVNALGY
VPNLVAGGLASARSRVVAMVIPNISGPIFANTIQGFSDTLSQHGFQLLLASSYFSAEQEE
SAVRAFLGWSPAALVLTSRFHSPATEKMIEQTDVPVIETWDHQPERSPIQIGFSHYDVGV
TAARYLYDKGYRRIAFVQNSIAGDFSALERRDGYIATLEGLGIKPWVFVPDAGRAPFEAG
KQAMETLMRQTPRPDAIFFANDNLAAGALLASQRAGMHIPQDCAVMGFGDYAFAEMMLPS
LTTIKPPALEIGVLAATRVLESLGVLPVEGDIQRLNLLECRLVEREST
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgagaaacccgcgacacgcaaacgccgaggcgcaggccgggtgacgatcacg
gcagtggcgcgtgaggccggtgtctcggccattaccgtatcgcgctatttcaatcagccg
gagcaagtctcgcccgaactgcgtgagcggattgcagccgtggtcaatgcgctgggctat
gtgcccaatctggtggcaggcggcctggcgtcggcgcgcagccgggtggtagcgatggtg
attcccaacatctccgggccgatcttcgccaacaccattcagggtttcagcgacacgctg
agccagcatggttttcagttgctgctggcctccagctacttttccgccgaacaggaagaa
agcgcagtgcgggcgtttctgggctggtcaccggcagcactggtgctgaccagtcgtttc
cacagcccggctaccgagaaaatgatcgagcagaccgatgtcccggtgatcgaaacctgg
gaccaccagcccgaacgcagcccgatccagattggcttttctcactatgacgtcggcgtc
acggcagcccgctatttgtacgacaagggctaccgccgcatcgcgttcgtgcagaacagc
attgcaggcgacttcagcgcactggagcggcgtgacggctatatcgccacacttgaaggg
ctcggcatcaaaccgtgggtctttgtccctgacgccggacgcgcgccgttcgaggcgggc
aaacaggccatggaaacactaatgcgccaaacaccgcgccccgacgccatcttcttcgcc
aacgacaacctggcagccggtgccctgctcgccagccagcgcgcaggcatgcatataccg
caggattgcgccgtgatgggctttggcgattacgccttcgcagaaatgatgctacccagc
ctgaccaccatcaaaccgccagcactggagatcggcgtactggccgcaacgcgtgtgctt
gaaagccttggcgtgttgccggtggagggagacatacagcggctgaatttgctggagtgc
agattggtggagcgggagagtacatga
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