KEGG   Pseudomonas amygdali: BKM19_028860
Entry
BKM19_028860      CDS       T05354                                 
Name
(GenBank) type VI secretion system tip protein VgrG
  KO
K11904  type VI secretion system secreted protein VgrG
Organism
pamg  Pseudomonas amygdali
Pathway
pamg03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:pamg00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    BKM19_028860
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pamg02044]
    BKM19_028860
Secretion system [BR:pamg02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   BKM19_028860
SSDB
Motif
Pfam: Phage_GPD Gp5_trimer_C Phage_base_V DUF6484 DUF2345 Gp5_C OB_DEPS-1_2nd
Other DBs
NCBI-ProteinID: AVB17126
UniProt: A0AB35R036
LinkDB
Position
5908536..5910395
AA seq 619 aa
MLMDLAAMLSPQNRRLFKFKNLANPEQELLLESFRGSEGLSRAYQFDLLLVCQDSGVELK
SMMGQHVVIEIELADGSPRYIAGYLTRFASGGSDGGMAKYTATLNPWFSMLKNRFDTRIF
QGNTVEEVVTQVFAMCTAFSKHEFRLSKPLKRYTYITQYRESDFNFVQRLLEEEGMFYYF
EHTAEGHTMIICDDSTTLVPLPEQPQIRFHSASVTETADSIIEWNGDRKLQSGKIAVQTF
DYRQPNNRLPVAMNSLNQQGDVENFEVYDFPGQYTHGTYDEGEALLRLRVEALELRGKSF
RGTSNCRAMKPGYTFELLQHYDHDQGSPEDRQFLLVLVDSEGHNNYLNGQQASYFNTFSC
VRKKIVFRPQLTTNRSVISGPQTAIVVGPPGEEIFTDELGRVKIQFHWDRKGEHNDKSSC
WVRVAQSGASGGFGSIQIPRVGDEVVVVFLDGNPDRPLVMGSLYNSQNTPPWSLPANKTQ
SGFLTRSAKGDGGTANFFRFEDKAGAEQVIVHAERNMDTEIELDETHDVGNNRSVTVGGK
NTEIIQNDTLLKVEQGSLTITVDKQSIDITAMTEITLTVGTSSITLKPSSIEIKGDEIKV
LGKNTFVEGDRVDINIEKS
NT seq 1860 nt   +upstreamnt  +downstreamnt
atgttgatggaccttgccgcgatgctttcgccgcagaaccggcgccttttcaaattcaag
aacctcgcgaatcccgagcaggagctgctgctggagtcctttagagggtctgaaggtctg
tcacgtgcataccaatttgacctgctgctggtgtgccaggactccggagtcgagctgaaa
tcgatgatgggccagcacgtggttatcgaaatcgagctggccgatggctcgccacgctat
atcgctggctatctcacgcgctttgccagcggtggcagcgacggcggcatggccaaatac
acggcaacgctcaacccctggttctcgatgctgaagaaccgcttcgacacacgtatcttc
caggggaatacggtagaggaagtcgttacccaagtgttcgcgatgtgtaccgcgttctcc
aagcatgagtttcgcctgagcaagcctctcaagcgctatacctacatcactcaataccgc
gaatccgacttcaacttcgtccagcgtctgctggaagaagaagggatgttctattacttc
gagcacaccgccgaaggtcacaccatgatcatctgcgacgactccaccacgctggtgccg
ttgccggagcagccccagatacgcttccactcggcgtcggtcaccgagacagccgactcc
atcatcgaatggaacggcgaccgcaaactacaatcagggaaaatagcggttcagacgttt
gactatcgtcagccaaacaacaggctgccggtcgccatgaacagcctgaaccagcagggt
gatgtcgagaacttcgaggtgtacgactttcccggccagtacacccatggcacctacgat
gaaggtgaagcgctgttgcgcttgcgcgttgaagcgcttgagctgaggggcaagagcttt
aggggcaccagtaactgtcgtgccatgaagcctggctacaccttcgaactgctgcagcat
tacgaccacgatcagggctcacctgaagaccgccagttcctgctcgtgcttgttgatagt
gaaggccacaacaattatctcaacggccagcaagccagctacttcaacaccttctcctgt
gtacgcaagaagatagtttttcgcccgcagctcactaccaatcgctctgtcatttccggg
ccgcagaccgccatcgttgtgggtccgcccggagaagaaatctttaccgacgaactgggt
cgcgtaaagattcagttccactgggaccgcaaaggcgagcacaacgacaaaagctcctgc
tgggtccgcgtcgctcaatccggtgcaagtggcggttttggtagcatccagatcccgcgc
gtcggtgacgaggtggtggtcgttttccttgatggtaaccctgaccgtccactagtcatg
ggcagtttgtacaacagccagaacacgccgccgtggtcgttgcctgccaacaagacccaa
agcggtttcctgacgcgttcggccaagggtgatggcggtacggccaacttcttccgcttt
gaagacaaggccggtgccgaacaggtgattgtgcatgccgagcgcaacatggacaccgag
atcgagctggatgagacgcatgacgtgggtaataaccgcagtgtgactgtcggcggtaag
aatacggaaattattcagaacgacactttgctcaaggtagagcaaggctcattgacgatt
accgtggacaaacagtctatcgacattacggccatgacggagatcaccctcactgtaggt
accagtagcattaccctcaagccgagcagcatcgaaatcaagggcgacgaaataaaggtt
ctcggcaaaaacacctttgtcgaaggtgaccgtgtcgatatcaatatcgagaaatcctga

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