KEGG   Pseudomonas amygdali: BKM19_030415
Entry
BKM19_030415      CDS       T05354                                 
Name
(GenBank) type II toxin-antitoxin system HicB family antitoxin
  KO
K18843  antitoxin HicB
Organism
pamg  Pseudomonas amygdali
Brite
KEGG Orthology (KO) [BR:pamg00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:pamg02048]
    BKM19_030415
Prokaryotic defense system [BR:pamg02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   HicA-HicB
    BKM19_030415
SSDB
Motif
Pfam: HTH_26 HTH_11 CENP-B_N HTH_23 HTH_29 HTH_31 KORA Crp HTH_7 HVO_A0261_N HTH_28 HicB-like_2 HTH_Crp_2 MarR_2 Phage_NinH HTH_38 HTH_3 HicB_lk_antitox Dimerisation WYL_3 YdaS_toxin
Other DBs
NCBI-ProteinID: AVB17676
LinkDB
Position
p2_tig3:85618..86040
AA seq 140 aa
MYQYPLTQHQEQTGVWLSCPNIPEMNASGETLTEALDEALNGMESALSLYVDQRRKIPQA
SLPVGDELVMHLPALTVAKIMLWNSMLDNGVSRAELARRLGCTRQVVDRLVDFLHTSKIE
QVERALGLLGRRITLSLEAA
NT seq 423 nt   +upstreamnt  +downstreamnt
atgtatcagtatccgctgacgcagcatcaagaacagactggcgtctggctttcttgcccg
aacatccccgaaatgaacgcatcaggtgaaaccttgaccgaggccctggacgaagccctg
aacggtatggagtcggcattgtcgctctatgtcgaccagcgccgaaaaatcccgcaggcg
tcactaccagtcggtgacgagctggtgatgcacctgcctgcgctgaccgtcgccaagatc
atgctgtggaacagcatgttggacaacggcgtgagccgtgcggagctggcgcgccgcctg
ggctgtacgcggcaagtcgtggatcggctggtggacttcctgcacacctcgaaaatcgag
caggtcgagcgagcgctaggcctactgggcaggcgtatcacgctgagccttgaggcggcg
tga

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