KEGG   Pseudomonas amygdali: BKM19_031060
Entry
BKM19_031060      CDS       T05354                                 
Name
(GenBank) lytic transglycosylase
  KO
K03194  type IV secretion system protein VirB1
Organism
pamg  Pseudomonas amygdali
Pathway
pamg03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:pamg00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    BKM19_031060
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pamg02044]
    BKM19_031060
Secretion system [BR:pamg02044]
 Type IV secretion system
  Conjugal DNA-protein transfer (VirB/D) protein
   BKM19_031060
SSDB
Motif
Pfam: SLT TraH_2
Other DBs
NCBI-ProteinID: AVB17793
LinkDB
Position
p3_tig5:complement(32174..32899)
AA seq 241 aa
MLTTSAFLALAMQCAPSIHPATLTPIVKTESSFNPYAIGVVGKVLPRQPQSLDEAVLVVK
QLVEEGADFSIGLGQINRQHFDVSRPEPVFEPCTNLRMTAAVLGQCYAVVSAKEPNRQAA
LHKAISCYYSGNPKRGFKAEAEFGGSSHVQRVLANAGTTTVTVPALEGGSAEPSQLQRAQ
APASTVEPTYESWDVLRQYPRNLPPATPAVSAPSAPSAPSAAPAVPASPPDEPSTLPKED
Q
NT seq 726 nt   +upstreamnt  +downstreamnt
atgctcaccaccagcgccttcctggccctggctatgcaatgcgctccctcgatacaccct
gccacgcttacccccatcgtcaagacagaatcctccttcaatccctatgccattggcgtg
gtcggcaaagtgttgccgcgtcaaccgcaaagcctggatgaagctgtattggtggtgaag
cagctggtggaggagggcgctgatttcagcatcggcctgggccagatcaaccggcagcac
ttcgatgtcagccgacccgaacctgtattcgaaccctgtaccaatctgcgcatgaccgcc
gctgttcttggacagtgctatgcagtggtcagcgccaaggagcctaaccggcaggccgcg
ctgcacaaggctatttcctgctactacagcggcaaccccaaacgtggcttcaaggccgag
gccgaattcggtggcagcagccacgtgcagcgtgtgttggccaatgccggcacgaccacc
gtgaccgtcccggcgctggaaggcggctccgctgagccaagccagctccagcgcgctcag
gccccggcgtccaccgttgaaccgacctatgaaagctgggacgtgttgcgccagtacccc
cgcaatctgccaccggcaacaccggctgtttctgctccatccgctccatccgctccatcc
gctgcacccgctgttcccgcttcaccccctgatgaaccctcaactctccctaaagaggat
caatga

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