KEGG   Pseudomonas amygdali: BKM19_031250
Entry
BKM19_031250      CDS       T05354                                 
Name
(GenBank) lytic transglycosylase
  KO
K03194  type IV secretion system protein VirB1
Organism
pamg  Pseudomonas amygdali
Pathway
pamg03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:pamg00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    BKM19_031250
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pamg02044]
    BKM19_031250
Secretion system [BR:pamg02044]
 Type IV secretion system
  Conjugal DNA-protein transfer (VirB/D) protein
   BKM19_031250
SSDB
Motif
Pfam: SLT TraH_2
Other DBs
NCBI-ProteinID: AVB17832
LinkDB
Position
p4_tig6:17547..18254
AA seq 235 aa
MLTTSAFLALAMQCAPSIHPATLTPIVKTESSFNPYAIGVVGKVLPRQPQSLDEAVLAVK
KLVAEGADFSIGLGQINRQHFDVSRPEPVFEPCTNLRMAAAVLEQCYAVTSAKEPNRQVA
LHKAISCYYSGNPKRGFKAEAEFGGSSHVQRVLANAGGTSVTVPALEGGSAEPSQLQRAQ
APVSAVEPTYESWDVLRQYPRYLPPAPPPVSAPSASPAVPASPPEQPSNLPEEDQ
NT seq 708 nt   +upstreamnt  +downstreamnt
atgctcaccaccagtgccttcctggccctggctatgcaatgcgctccctcgatacaccct
gccacgctgacccccatcgtcaagacagaatcctccttcaatccctatgccattggcgtg
gtcggcaaagtgttgccgcgtcaaccgcaaagcctggatgaagccgtattggcggtgaaa
aagctggtggcagagggcgcagatttcagcattggcctaggccagatcaaccggcaacat
ttcgatgtcagccgacccgaacctgtattcgaaccctgtaccaatctgcgcatggccgcc
gctgttcttgaacagtgctatgcagtgaccagcgccaaggagcccaaccggcaggtagcg
ctgcacaaggctatttcctgctactacagcggcaaccccaaacgtggctttaaggccgag
gccgaatttggtggcagcagccacgtgcaacgtgtgttggccaatgcaggcggtaccagc
gtcactgtccccgcgctggaaggcggctccgctgagccaagccagctccagcgcgctcag
gccccggtatccgccgttgagccgacctatgaaagctgggacgtgctgcgtcagtacccg
cgttatctgccacctgcgccaccgcctgtttctgctccatccgcttcacccgcagtgccc
gcttcaccccctgaacaaccctcaaatctccctgaagaggatcaatga

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