Paracoccus aminophilus: JCM7686_0520
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Entry
JCM7686_0520 CDS
T02792
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
pami
Paracoccus aminophilus
Pathway
pami00300
Lysine biosynthesis
pami00470
D-Amino acid metabolism
pami01100
Metabolic pathways
pami01110
Biosynthesis of secondary metabolites
pami01120
Microbial metabolism in diverse environments
pami01230
Biosynthesis of amino acids
Module
pami_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pami00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
JCM7686_0520
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
JCM7686_0520
Enzymes [BR:
pami01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
JCM7686_0520
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
DNA_pol_B_2
Motif
Other DBs
NCBI-ProteinID:
AGT07629
UniProt:
S5XKB0
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All DBs
Position
469194..470597
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AA seq
467 aa
AA seq
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MVPDRNHDTAQLDRFAHLSGDGVGHWLRASALSFPPLSQDRLMDHFNYKDGVLCAEDVPL
AQIAEAVGTPVYVYSTATLTRHFQQFQKALDWTDHLVCFAVKSNSNIAVLKVLGDLGAGM
DVVSGGEYARAKAAGVPGERIVFSGVGKTEDEMRLALEGGIRQFNVESEPELLLLSEVAT
SLGVTAPIALRVNPDVDAHTHEKIATGKSDNKFGIPIAKSRAVYALAASLPGIEVVGVDM
HIGSQLTELEPFRQAYAKMAELVTALREDGHDIRRLDMGGGLGIPYRRDNNAPPLPVEYG
KVVREAVGHLGCEIEIEPGRNISGNAGILLSSVIYLKEGEGRDFLILDAAMNDLMRPAMY
GAHHDIVPVIEPELAAEVAPFDVVGPVCESGDTFEKGMQLNRFAAGDLVAFRSAGAYGAV
MASEYNTRPLVPEVLVSGDQFAVIRARPSIEEIIARDAIPGWMTAKS
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
gtggtgcctgatcgaaaccacgatacggcgcaactggaccgctttgctcacctttccggc
gatggcgttgggcattggctgcgcgcttccgctttatcttttcctccgctctcgcaggat
cgtctgatggatcacttcaactacaaggatggcgtgctctgcgccgaggacgtgccgctg
gcccagatcgccgaagcggtcggcacgccggtctatgtctattcgacggcgacgctgacg
cgccatttccagcagttccagaaggcgctggactggaccgaccatctggtctgctttgcg
gtcaaatcgaattcgaatatcgcggtcctgaaggtgctgggcgatctcggcgcggggatg
gatgtggtctcgggcggcgagtatgcgcgcgccaaggcagcaggcgtcccgggcgagcgc
atcgtcttttccggcgtcggcaagaccgaggacgagatgcgtctggcgctggaaggcggc
atccgtcaattcaacgtcgaatccgagccggagctgctgctgctctcggaggtcgcgacc
tctttgggcgtcaccgcgccgattgctttgcgcgtgaaccccgatgtcgatgcccatacc
catgaaaagatcgcgaccggcaaatccgacaacaaattcggcattccgatcgccaaatcc
cgtgcggtctatgcgcttgcggccagcctgcccgggatcgaggtcgtcggcgtcgatatg
catatcggcagtcaactgaccgagctcgagcccttccgccaagcctatgccaaaatggcc
gagctggtcacggctctgcgtgaagacggccacgacatccgccgtctggatatgggcggc
gggcttggcattccctaccgccgcgacaacaacgccccgccacttccggtcgaatatggc
aaggtcgtgcgcgaggcggttggccatcttggctgcgagatcgagatcgagccgggccgc
aatatctcgggcaatgccgggattttgctctcgtcggtgatctatctcaaggaaggcgag
ggccgcgatttcctgatcctcgacgccgccatgaacgatctgatgcgcccggccatgtat
ggcgcgcatcatgacatcgtcccggtgatcgagcccgaactcgccgccgaagtcgccccc
ttcgacgtggtgggtccggtctgcgaatccggcgacaccttcgaaaaagggatgcagctc
aaccgctttgcggcgggcgatctggtggccttccgctcggcgggcgcttatggcgcggtg
atggcctcggaatataacacccgtccgctggtgcccgaggttctggtctcgggcgatcaa
ttcgccgtcatccgcgcgcgcccctcgatcgaagagatcattgcgcgcgacgcgatcccc
ggctggatgaccgcgaaaagctga
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