Paracoccus aminophilus: JCM7686_0886
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Entry
JCM7686_0886 CDS
T02792
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
pami
Paracoccus aminophilus
Brite
KEGG Orthology (KO) [BR:
pami00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pami03016
]
JCM7686_0886
Enzymes [BR:
pami01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
JCM7686_0886
Transfer RNA biogenesis [BR:
pami03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
JCM7686_0886
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
RTBV_P46
Motif
Other DBs
NCBI-ProteinID:
AGT07995
UniProt:
S5XX28
LinkDB
All DBs
Position
844686..845966
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AA seq
426 aa
AA seq
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MFVGQICFCTVIFQRRIGGRPAHIERLRRMSAPAIETITTTEALAAFCAEAKTMPYVTLD
TEFLRERTYYSKLCLIQAALPPAGIGKGGSGGGRAVLIDPIVGNMSLEPLYDLFRHQATV
KVFHAARQDLEIFYHDAGVLPDPLFDTQIAAMVCGFGEQAGYETLVKKIARQPLDKSSRF
TDWSRRPLTEDQAAYAIADVIHLRAIYEYLSAQLQKTGRGPWVEEEVGVLLDPETYITRP
DEAWERVRTRSGSPRFLAVVRELARFREIYAQKNDVPRSRVYKDDALIELASTRPLNEND
LGKSRLLLREARKGEIATGILAAVKAGTEAKELPKATLEEPGRPGNAALADLLRVLLKAK
SDAADVAPKLIASSADLDAIASGARDLPALSGWRAEVFGKDALRLAAGEIALSAEGGAVR
IVPVTG
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgtttgttggccaaatctgtttctgcactgtcatattccagagaagaattggcggacga
cccgcccatatcgaaaggctcaggcggatgtccgcaccagcgattgaaacgatcaccacc
accgaagcccttgccgcattctgcgccgaggcgaagacgatgccctatgtcacgctcgac
accgagttcctgcgtgagcgcacctattactcgaagctttgtctgattcaggccgcgctt
ccgccggcggggatcggcaagggcggcagcggcggtggtcgcgcggtgctgatcgacccg
atcgtcgggaatatgtcgcttgagccgctttatgacctcttccgccatcaggcgacggtc
aaggtcttccatgccgcgcgtcaggatcttgagatcttttaccacgatgccggtgtgctg
cccgacccgctgtttgacacccagatcgcggccatggtctgcggtttcggcgaacaggcg
ggttatgagacgctggtcaagaagatcgcccgccagccgctcgacaaatcgagccggttc
accgattggtcgcgccgcccgctgaccgaggatcaggccgcttatgccatcgccgatgtc
atccatctgcgcgcgatctacgaatatctctcggcgcagctgcaaaagaccggacgtggc
ccctgggtcgaagaagaggtcggcgtcctcttggaccccgagacctatatcacccgcccc
gacgaggcttgggagcgggtgcgcacgcgctcgggctcgccgcggtttttggcggtggtg
cgcgagctcgcgcggtttcgcgagatctatgcccagaagaacgacgtgccgcgctcgcgc
gtttacaaggatgatgcgctgatcgagttggcctcgacgcggccgctcaatgaaaacgat
ctcggcaagtcgcggctgttgctgcgtgaggcgcgcaagggcgagattgccacgggcatt
ctggctgccgtgaaggccgggaccgaggccaaggagctgcccaaagccacgctggaagag
ccgggccgtcctggcaatgccgctttggccgatctcttgcgcgtgctcctcaaggcgaaa
tcggatgcggcggatgtcgcgccgaagctgatcgcctcttcggccgatcttgacgccatc
gcctcgggcgcgcgcgatctgcccgccctcagcggctggcgggctgaggttttcggcaag
gatgcgctgcggctggcggcgggcgagattgcgctttcggcggaagggggcgcggtgcgg
atcgtgccggtcacaggctga
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