Paracoccus aminophilus: JCM7686_1318
Help
Entry
JCM7686_1318 CDS
T02792
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
pami
Paracoccus aminophilus
Pathway
pami03030
DNA replication
pami03430
Mismatch repair
pami03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pami00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JCM7686_1318
03430 Mismatch repair
JCM7686_1318
03440 Homologous recombination
JCM7686_1318
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pami03032
]
JCM7686_1318
03400 DNA repair and recombination proteins [BR:
pami03400
]
JCM7686_1318
Enzymes [BR:
pami01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JCM7686_1318
DNA replication proteins [BR:
pami03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
JCM7686_1318
DNA repair and recombination proteins [BR:
pami03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
JCM7686_1318
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HROB
DUF655
SbcD_C
Motif
Other DBs
NCBI-ProteinID:
AGT08419
UniProt:
S5XM87
LinkDB
All DBs
Position
1294621..1298094
Genome browser
AA seq
1157 aa
AA seq
DB search
MTQSSPRFIHLRTHSEHSLLEGAIHAAKLPALAAEMGMPAVALTDSNALFAGLEFSVKSQ
DKGVQPIIGCQVSVVTEKVTGPIVLLAQNRAGWLNLMSLSTVLYMREGTAPVHVTLAELE
SRTEGLICLTGGALGPLGQLVGQGLLPEARAFVEELKRFYPDRLYVELQRHRDGSGQPVA
EEVSAEGGMIDLAYALDLPLVATNDVYFPKPDLYDAHDALICIAERAYVDQTQPRRRLTP
SHYFKSSEEMAALFADLPEAIENTVEIARRCSFAVAKHKPILPRFADDEVVELRRQAEEG
LARRLAVIPHSTTVEEYEKRLQFELDIIEQMGFPGYFLIVADFIKWAKDHGIPVGPGRGS
GAGSLVAYALTITDIDPLRYSLLFERFLNPERVSMPDFDIDFCMDRREEVIRYVQDRYGR
DKVGQIITFGALLSKAAVRDVGRVLQLPFGQVDRLSKMIPVEGVKPVSVTKALADEPRLR
EAAKEEVVARLLDYAAKLEGLYRNASTHAAGVVISPDPLDQLVPIYRDPASDMPATQFNM
KWVEQAGLVKFDFLGLKTLTVIQNAVDLIRGGGRHLHIAPDGRTLYAPPETEIDEINAIP
LDDAPTYELFSAARTVAVFQVESSGMMDALRRMRPTCIEDIVALVALYRPGPMENIPTYC
DVKNGVKPLESLHPTIDPILSETQGIIVYQEQVMQIAQVMAGYSLGGADLLRRAMGKKIA
EEMAKERPKFVEGCKAQGIDAKKSGEVFDLLEKFANYGFNKSHAAAYAVVSYQTAWLKAN
HPVEFMAAVMNCDIHLTDKLAIYKRETDRMGIEMVPPCVNRSLATYSVKEGRIHYALGAL
KGVGGEAMNLIVKARGETPFRDMVDFARRVDMKRVGKRPLETLARAGAFDQLDPNRSKVL
RALDGLVAWSAAVQEAAQSNQSSLFGGGEDLPPPRAVTAPLWLPTEKLAEEHAAVGFYLS
GHPLDDYQTALKRKNVSTLAEITLAAQDGAMVASIAGTVSSRQEKKSAKGTRYAFVSLSD
PTGLYEVTVFSDTLDAHRQDLEPGANVVLQVQVEPSGELVKLLARGVTPLEAAIADAGAD
RLAITIADLHPVPEIAAALQRILSEVKAPARARGPISLRFRDGDDLVDVEIAADAPLTTP
ARQALRAIPGVLEIVDE
NT seq
3474 nt
NT seq
+upstream
nt +downstream
nt
atgacccaaagctctcctcgattcattcacctgcgcacccattccgagcattcgcttctg
gagggcgcgatccatgcggccaagctgcccgcgcttgcggccgagatggggatgccggcg
gtcgcgttgaccgacagcaatgcgcttttcgcggggctcgagttttcggtcaaatcgcag
gacaagggcgtgcagccgatcatcggctgtcaggtcagcgtcgtgaccgagaaagtgacc
gggccgatcgtgcttttggcgcagaaccgggcgggctggctcaatctgatgagcctttcg
acggtgctttacatgcgcgagggcacggcaccggtccacgtcactctggccgagctggaa
agccggacagaggggctgatctgtctgaccggcggggcgcttgggcccttgggccaattg
gtcggccaggggcttttgcccgaggcgcgcgctttcgtcgaagagctcaagcgtttttac
cccgaccggctttatgtcgagctgcaacgccatcgcgacggctcgggccaacccgtggct
gaagaggtctcggccgaggggggcatgattgatctggcctatgcgctcgatctgccattg
gtcgcgacgaatgatgtctatttcccgaagcccgatctttacgacgcccatgatgcgctg
atctgcatcgccgagcgcgcctatgtcgatcagacccagccgcgccgccgtctgacgccg
tcccattacttcaaatcctccgaggaaatggccgcgcttttcgccgatctgcccgaggcg
atcgagaataccgtggaaatcgcgcggcgctgctcttttgccgtggccaagcacaagccg
atcctgccgcgctttgccgatgacgaggtggtcgagcttcggcgtcaggccgaggagggg
ctggcgcggcgcttggcggtcattcctcattcgaccacggtcgaggaatatgaaaagcgc
ctgcaattcgagctcgatatcatcgagcagatgggttttcccggctatttcctgatcgtt
gccgattttatcaaatgggccaaggatcacggcattccagtcgggccgggccgggggtcg
ggtgcgggctcgctcgtcgcctatgcgctgaccattaccgatatcgatcccttgcgctat
tcgctgctctttgagcgcttcctcaaccccgagcgggtctcgatgccggacttcgacatc
gacttctgcatggatcgccgcgaagaggtcattcgctacgttcaggaccgctatggccgc
gacaaggtcggccagatcatcaccttcggtgcgcttttgtcgaaagccgcggtacgcgac
gtgggccgcgtgctgcaattgcccttcggtcaggtcgatcgtctgtcgaagatgatcccg
gttgagggagtgaagccggtttcggtgacgaaggcgctggccgatgagccgcgtctgcgc
gaggcggcgaaggaagaggtcgtcgcgcggctgctcgattatgcggccaagctcgaaggg
ctttaccgcaacgcctcgacccatgccgcgggggtggtgatctcgcccgatccgctcgat
cagctggtgccgatctaccgcgatccggcctcggacatgcccgcgacccagttcaatatg
aaatgggtcgagcaggccggtctggtcaaattcgactttcttggcctgaagacactgacc
gtcatccaaaacgccgtcgatctgatccggggcggtggacgacatctgcatatcgcgccc
gatggccgcacgctttatgcgccgcccgagaccgagatcgacgaaatcaacgcgatcccg
ctggatgacgcgccgacctatgagctcttctcggcggcgcgcacggttgcggtctttcag
gtggaaagctcgggcatgatggatgcgctgcggcgcatgcgcccgacctgtatcgaggat
atcgtggccctcgtggcgctttaccgccccggcccgatggagaatatcccgacctattgc
gatgtgaagaacggcgttaaaccgctggaatccttgcatccgacgattgatccgatcctg
tccgagacgcagggcatcatcgtctatcaggaacaggtgatgcagatcgcgcaggtcatg
gcgggttattcgcttggcggcgccgacctgttgcgccgcgccatgggcaagaagatcgcc
gaggaaatggccaaggagcgcccgaaattcgtcgagggctgcaaggcgcaggggattgat
gccaagaaatcgggcgaggttttcgacctgctcgaaaaattcgcgaattacggcttcaac
aaatctcacgccgccgcctatgccgtggtcagctatcagacggcttggctcaaggcgaac
catccggtcgagttcatggctgcggtgatgaactgcgatatccatctgaccgacaaactt
gcgatctataagcgcgagaccgaccggatggggatcgagatggtgccgccttgcgtgaac
cgctcgcttgccacctatagcgtgaaagaggggcgcatccattatgcgctcggcgcgctc
aaaggtgtcggtggcgaggcgatgaatctgatcgtcaaggcgcggggcgagacgcccttc
cgcgatatggtcgattttgcacgccgggttgatatgaagcgtgtgggcaagcggccgctc
gaaactttggcgcgggccggggctttcgatcagctcgatccgaaccgctcgaaagtgctg
cgtgcgcttgacgggctggtcgcttggtcggcggcggtgcaagaggccgcgcaatcgaac
cagagctcgctgttcgggggcggcgaggatctgccgccgccgcgcgccgtcaccgcgcct
ttgtggctgccgaccgagaaactggccgaggaacatgcggcggtcggcttctatctctcg
ggccatccgctcgacgattatcagaccgcgctcaagcgcaagaatgtttcgaccttggcc
gagatcacgctggcggcgcaggatggcgcgatggttgcctcgattgcgggcacggtctcg
agccggcaagagaagaaatcggccaagggcacgcgctacgcctttgtcagcctgtcggac
ccgaccgggctttacgaggtcacggtcttttccgacacgctcgacgcgcatcggcaggat
cttgaaccgggcgccaatgtcgtcttgcaggtgcaggtcgagccctcgggcgaattggtc
aagcttttggcgcgcggcgtcacgccgctcgaagccgcgattgccgatgccggggccgac
cgtctggcgatcacgattgccgatcttcatccggttcccgagatcgcggccgccctgcaa
cgcattctgagcgaggtcaaagcgcccgcgcgggcccgcggtccgatcagtctgcgattc
cgtgacggcgacgatttggtcgatgtcgagatcgctgcggatgccccgctcacaaccccc
gcgcgacaggccctaagggcaattcccggcgtgctcgaaatcgtcgacgaataa
DBGET
integrated database retrieval system
