Paracoccus aminophilus: JCM7686_2891
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Entry
JCM7686_2891 CDS
T02792
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
pami
Paracoccus aminophilus
Pathway
pami03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pami00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
JCM7686_2891
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pami03400
]
JCM7686_2891
Enzymes [BR:
pami01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
JCM7686_2891
DNA repair and recombination proteins [BR:
pami03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
JCM7686_2891
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
AGT09947
UniProt:
S5XXA0
LinkDB
All DBs
Position
complement(2993572..2994438)
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AA seq
288 aa
AA seq
DB search
MSKIRRTGAVWVNFICLFLRFRPILPSMKIASFNINGVRARIQQLTDWLEASAPDVVVLQ
EIKTQDESFPREELEDRGWTVETFGQKGFNGVAILSKLPLEDISRGLPGDDSDEQSRWIE
ATVIGDRAVRIAGLYLPNGNPAPGPKYDYKLAWMERLAARAAEFLKSEMPVVMLGDYNVI
PQPRDAAFPEKWLTDALFLPESRASLRRIEYQGWTEILRLRNLDAASGPFTFWDYQAGAW
EKNNGIRIDHLLLSPQAADLVIDAGIDRDQRAAEKPSDHVPVWVDLAA
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaagatacgcagaacaggcgcggtctgggtgaacttcatttgcctcttcctccgg
ttccggcctattctgcctagcatgaaaatcgctagcttcaacatcaacggcgtccgcgcc
cgcattcagcaactgaccgactggctcgaggcaagcgcgcccgatgtcgtcgtgctgcag
gaaatcaagacgcaggacgaaagcttcccgcgcgaggaactcgaggatcgcggctggacg
gtcgagaccttcggccaaaagggcttcaacggcgtcgccatcctgtcgaaattgccgctc
gaggacatctcgcgcggcctgcccggcgatgacagcgacgagcaatcgcgctggatcgag
gcgaccgtgatcggcgatcgcgccgtgcgcatcgcgggcctctatctgccgaatggcaac
ccggcgccgggtccgaaatatgattacaaactcgcctggatggagcgtctcgccgcccgc
gccgccgaattcctgaaatccgagatgccggtggtgatgctcggcgattacaacgtcatc
ccccagccccgcgacgcggctttccccgaaaaatggctgacggatgcgctctttttaccc
gaaagccgcgccagcctgcgccgcatcgaatatcagggctggaccgagatcctgcgcctg
cgcaaccttgatgccgcctccggccccttcaccttctgggactatcaggcgggcgcttgg
gagaaaaacaacggcatccgcattgaccatctgctgctcagcccacaggccgcggacctt
gtgatcgacgcaggcatcgaccgcgaccagcgcgcggcggaaaagccaagcgatcacgtc
ccggtctgggtcgatctcgccgcctaa
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