Paracoccus aminophilus: JCM7686_2981
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Entry
JCM7686_2981 CDS
T02792
Name
(GenBank) 23S rRNA (Uracil-5-)-methyltransferase RumA
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
pami
Paracoccus aminophilus
Brite
KEGG Orthology (KO) [BR:
pami00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pami03009
]
JCM7686_2981
Enzymes [BR:
pami01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
JCM7686_2981
Ribosome biogenesis [BR:
pami03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
JCM7686_2981
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
MTS
TRM5-TYW2_MTfase
Motif
Other DBs
NCBI-ProteinID:
AGT10017
UniProt:
S5XXK0
LinkDB
All DBs
Position
3081782..3083023
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AA seq
413 aa
AA seq
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MSEDTIRDWTVERLGRRGDGVAFDAAGQRALAARVLPGEVIAGAPVEGRIADPKIVTPSP
ERIRSACPHYRACGGCALMHASDGFVAGWKAGLVTSALAAQGIVAEVSGISTSPIRSRRR
AVLSGKRTKKGALVGFHARASDVIVDLQDCLVLRPAIQAALPFLRELVTAGGSRQAELSI
AVTETPQGLDLAVKGGKPMEPGLFAALSALSESGDLARLDWDGEPITRRPPALTMGRAQV
VPPPGGFLQATREGEAALVTAVRDILKDAGRIADLFAGCGTFTLPLAEQAEVDAFEGLAA
PLAALDSAWRKTATLKRVASHVRDLAKRPLQPDELAPYDAIVIDPPRAGAEPQAVELARS
GVQRLAWVSCDPVTFARDARILAEGGYQLRRLYVVDQFRWSAHVETVAEFARR
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgaagacacaatccgggactggaccgtcgagcggttggggcggcgtggcgatggc
gttgccttcgatgccgcaggtcagcgcgctctggccgcgcgcgtcctgcccggcgaggtg
atcgcgggcgcgcccgtcgagggccgcattgccgatccgaagatcgtgaccccctcaccc
gagcgcatccgctccgcctgcccgcattaccgcgcctgcggcggctgcgcgctcatgcat
gcgagcgacggcttcgttgccggctggaaggccgggctggtgacttccgcgctcgcggcg
cagggcatcgtggccgaggtctcgggcatctcgacctcgcccatccgctcgcgccgtcgc
gcggtgctgtcgggcaagcgcaccaagaagggcgcgctcgtggggtttcacgcccgcgcc
tcggatgtcatcgtcgatttgcaggattgccttgtcttgcgccccgccattcaggccgcc
ctgcccttcctgcgcgagttggtgacggctggcggctcgcgtcaggccgagctttcgatc
gcggtgaccgagacgccgcaggggctcgatctggcggtgaagggcggcaagccgatggag
cccggcctcttcgcggcgctctcggccctgagcgagagcggcgatcttgcgcggctcgac
tgggacggagagccgatcacccgccgtccgcccgcgctcaccatgggccgcgcgcaggtc
gtgccgccgccgggtggctttctgcaagcgacccgcgagggcgaggccgcgctggtgact
gcggtgcgcgacatcctgaaggatgccggccggatcgccgatcttttcgcgggctgcggc
accttcaccctgcctctggccgagcaggccgaggtcgatgccttcgaagggctggccgcg
ccgctcgccgcgctcgattcggcctggcgcaagacggcaaccctcaagcgagtcgccagc
catgtccgcgatctcgccaaacgcccgctgcagcccgatgagctggctccttatgacgcg
attgtgatcgacccgccgcgcgctggggcggaaccgcaagccgtcgaactggcgcgctcg
ggcgttcagcggctggcctgggtcagttgcgaccccgtgacttttgcaagggatgcgcgg
attctggccgaagggggctatcagttgcgccggctctatgtggtcgatcagttccgctgg
tccgcccatgtcgaaactgtcgcggaattcgctcgtcgctag
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