Paracoccus aminophilus: JCM7686_3281
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Entry
JCM7686_3281 CDS
T02792
Name
(GenBank) outer membrane protein
KO
K21449
trimeric autotransporter adhesin
Organism
pami
Paracoccus aminophilus
Brite
KEGG Orthology (KO) [BR:
pami00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pami02000
]
JCM7686_3281
Transporters [BR:
pami02000
]
Other transporters
Pores ion channels [TC:
1
]
JCM7686_3281
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YadA_stalk
YadA_head
YadA_anchor
Motif
Other DBs
NCBI-ProteinID:
AGT10316
UniProt:
S5YYM9
LinkDB
All DBs
Position
3401193..3404996
Genome browser
AA seq
1267 aa
AA seq
DB search
MSHKLLFSTNELLDSGLHGISQTSPLTRFPLGGAQASAQSSAPISGTTSRRWLGLSVSAL
PLVAALTMLATTDAARAADAVCVDPNNPSATVGTPAGTGDSVACGEGAVTGSAASVVVGA
NATIDTHSSGSLAFGSGAHITYSQGALAFGQNAGVNGGDSRAGYNSNGAVALGNGATIGA
SSGGAAAIGNGATIGSFSFNSMAIGNGASVSNQSESSVALGNGATISGANSNFSVALGYR
ATASAPWATAIGQNALAGDQSTTAIGSGAAAVYSNSIAIGSGAVTTYYNTIALGNNASAG
GRFGIALGNGAVSQNDNSVSIGSAAQAVWSNSIAIGSNARITYNNSVTIGSDSSAEGNAV
AVGQSATAAGTFGVAVGNGAVVGQRGYYGVAIGNGASVSTSYGVAIGNGAISGEANALAA
GNGATASGLSSLAFGQSAVATAQNAMAFGTSSAARGANSLAFGANSTASADNSFAFGANA
QAGTANSVALGASSQTAAAVGTASATIAGTSYTFAGGTPGGTISVGSDTLQRTVTNVAAG
RLSGTSTDAVNGSQLFATNQAVNGLNTSVTNLNTNALQWSTALGAYDASHGSGAPQQITN
VADAALTGSSTDAVNGRQLFATNQTVAGLNTNVTNLNTNALQWSTALGAYDASHGSGAPQ
RITNVADAALSATSSDAVNGRQLFATNELVSGLSNDLGNLNANALLWNASISAFDAGRGL
GTAHRITYVAAGDLSAASTDAVNGSQLYATNQTVAGLSTNALQWDATLGAYDASHGTGSA
QNITNVADGALTGTSTDAVNGSQLYATNQTVAGLSTDLGNLNANALLWSSALGAFDASRG
GVAQRITYVAAGDLSATSTDAVNGSQLYETNQTVASNAATVSSYLGGGADVTNGVAPSYS
VQGGTHHDVGSALNAVDNNLTTLNNQITNVAQGGTRYFQSNSTGTGAAASGTDSTAIGAS
SVASGTNSIAAGTNAQAEGSNAVALGANAVASNTGDVALGSGSVTQTAVQTSTMEVNGTT
YQVAGNATSTVSVGAEGAERTITNVAAGRVNATSTDAVNGSQLNATNEAISRLDSSIGTL
NRNAVQYDSTAAGGRGNSITLQGGDPSAPVLISNVAAGVANTDAVNVAQLHESAATTLST
ARSYTDTRFEAAVRRSREYTDTRAAETLRSANAYTDEKFASLTRDIGDVRRQAGQAAAIG
LAASSLRYDDRPGKLSVAMGGGNWKGENAMAMGLGYTSLDQSVRANLSAANAGGDWGVGL
GVSFTLN
NT seq
3804 nt
NT seq
+upstream
nt +downstream
nt
atgtcacacaagttattgttttcgaccaacgaactcctcgattcaggccttcacggaatt
tcacagacctcgcctttgacgcgttttccgctcggcggcgcgcaggcctctgcccaaagc
tctgcccctatttcgggcacaacctcgcggcgttggcttggccttagcgtatctgcgctg
ccgcttgtcgcggcgcttaccatgcttgcgaccacagatgcggcccgggcggcggatgcg
gtttgcgtcgatccgaacaatccctcggccacggtcggcacgcccgccgggaccggcgat
tcggttgcttgcggcgagggcgcggtgacgggttcggcggcttcggttgtggtcggcgcc
aatgcgacgattgacacccattcgagcggatctctggcctttggcagcggcgcgcatatc
acctacagccaaggcgcgctggcctttggtcagaacgcgggggtcaacggtggtgacagc
cgggccgggtataactcgaacggcgccgtggctttgggcaatggcgccacgattggcgca
agctcgggcggagcggcggccatcggcaatggtgccacgatcggcagcttctctttcaac
tcgatggccatcggcaatggcgcctcggtctcgaaccagagcgaaagctcggttgccttg
ggcaatggagcaaccatttcgggcgcaaactcgaacttctcggtggcccttggatatcgg
gcgaccgcaagcgcgccctgggcgaccgccattggccagaacgcgcttgctggcgatcag
agcaccacggccatcggctcgggtgcggccgccgtttacagcaattccatcgccatcggc
tcgggcgcggtgacgacctattacaacaccatcgcgctggggaacaacgccagcgccgga
ggccgtttcggcatcgccttgggcaatggcgcggtcagccagaacgacaattcggtgtcg
atcggcagtgcggcgcaggcggtgtggtcgaacagcatcgcgatcggcagcaatgcgcgg
atcacctataacaacagtgtcaccattgggtcggattccagcgccgagggcaatgccgtc
gcggtgggccaaagtgcgacggcggccggaacctttggcgtggccgtcggcaatggcgcc
gtcgtcgggcagcgtggctattacggcgtggccatcggcaacggggcaagcgtgagcacg
agctatggcgtcgccatcggcaacggcgcgatctcgggcgaggccaatgccttggccgca
ggcaatggcgcgacggcctctgggttgtcgtcgctggcctttggtcagagcgctgtagcg
acggcgcaaaacgccatggccttcggcaccagcagcgcggcgcggggcgcaaacagcctc
gccttcggggcaaacagcacggcgtcggcggataacagctttgcctttggcgcgaatgcc
caggccggcaccgccaacagcgtggcacttggcgcaagctcgcagacagcggcggcggtc
ggcacggccagcgcgacgattgcgggcacgagctataccttcgccgggggcacaccgggc
ggcacgatctcggtcggctcggatacgcttcagcgcacggtgaccaatgtcgcggcaggg
cggctgagcgggacctcgaccgatgccgtgaatggcagccagcttttcgccaccaatcag
gcggtgaatgggctgaacaccagcgtcaccaacctcaacaccaatgccctgcaatggagc
accgcgcttggtgcttatgacgcgagccatggctcgggcgcgccgcagcagatcaccaat
gtcgccgatgccgcgctgacgggcagctctaccgatgcggtcaacggccgccagcttttc
gcgaccaatcagaccgtcgccgggctgaacaccaatgtcaccaacctcaacaccaatgcc
ctgcaatggagcaccgcgcttggtgcttatgacgcgagccacggctcgggcgcgccgcag
cgcatcaccaatgtcgccgatgccgcgctctcggccacgtcgagcgatgcggtcaacggt
cgccagcttttcgcgaccaatgagctggtttccgggttgagcaatgatctgggcaacctc
aacgcgaacgcgcttttgtggaatgcctcgatctcggccttcgacgccgggcgtggcttg
ggcaccgcccaccgcatcacctatgtcgccgccggagatctatctgccgcctcgaccgat
gccgtcaatggcagccagctttatgcgaccaaccagaccgttgcgggcctgagcaccaat
gcgctgcaatgggacgcgacgcttggcgcctatgacgcgagccatggaactggcagcgcg
cagaacatcaccaatgtcgccgatggcgcgctgaccggcacctcaaccgatgcggtcaac
ggcagccagctttatgccaccaaccagaccgtcgcgggcctgagcaccgatcttggcaat
ctcaacgccaatgcgctcttgtggagcagcgcgctcggagcctttgacgcgagccgtggc
ggtgtcgcgcagcgtatcacttatgtcgctgccggagacctttccgccacctcgaccgat
gccgtcaacggtagccagctttacgagacgaaccagaccgtcgccagcaatgcggccacg
gtcagcagctatctgggtggcggcgcggatgtcacgaatggcgtggcgccgagctattcg
gtgcagggcggcacccatcacgatgtcggctcggccctgaatgcggtcgataacaatctg
acgacgctcaacaatcagatcaccaatgtggcccaaggcggcacgcgttacttccagtcg
aactcgaccggcaccggagccgctgccagcggcaccgacagcacggcgatcggggcctct
tcggtggcatccggaacgaacagcatcgctgccgggaccaatgcgcaggccgagggcagc
aatgccgtggcgcttggcgcgaatgcggtggcgagcaacaccggcgatgtcgcgctcggt
tctggttcggtgacgcaaacggcggtccagacctcgaccatggaggtcaacggcacgacc
tatcaggtcgcgggcaatgcgacctcgacggtctcggtgggcgcggagggcgccgaacgc
accatcaccaatgtcgccgcgggccgggtcaatgcgacctcgaccgatgcggtgaatggc
agccagcttaacgccaccaatgaagcgatctcgcggctggacagcagcatcggcacgctc
aatcgcaatgcggtgcaatatgacagcacggcggcgggcggccggggcaattcgatcacg
ctgcaaggcggcgatccgtctgcgccggtgctgatctcgaatgtcgcggcgggggtcgcc
aataccgatgcggtgaacgtggcccagctgcacgaaagtgccgcgaccacgctgtcgacg
gcgcgcagctataccgatacgcgcttcgaggcggcggtgcggcgttcgcgcgaatatacc
gacacccgcgcggcagagacgctgcgctcggccaatgcctataccgacgagaaattcgcc
tcgctgacccgtgacatcggtgatgtgcgccgtcaggccggtcaggcggcggcgatcggg
cttgcggcctcgtcgctgcgctatgacgaccgcccgggcaaactgagcgtcgcgatgggg
ggcggcaattggaaaggcgagaacgccatggcgatgggtctgggctatacgtcgctcgac
caatcggtgcgcgccaacctgtcggcggccaatgccggcggcgattggggcgtcggtctg
ggcgtcagcttcacgctgaactga
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