Paracoccus aminophilus: JCM7686_3439
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Entry
JCM7686_3439 CDS
T02792
Name
(GenBank) ATP-dependent DNA helicase, AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
pami
Paracoccus aminophilus
Brite
KEGG Orthology (KO) [BR:
pami00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pami03400
]
JCM7686_3439
Enzymes [BR:
pami01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
JCM7686_3439
DNA repair and recombination proteins [BR:
pami03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
JCM7686_3439
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_30
NitrOD2
Motif
Other DBs
NCBI-ProteinID:
AGT10474
UniProt:
S5XSQ3
LinkDB
All DBs
Position
complement(3566652..3570047)
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AA seq
1131 aa
AA seq
DB search
MMDEATLAQVRAADPGRSTWLTANAGSGKTRVLTDRVARLLLAGTAPERILCLTYTKAAA
TEMQNRLLKRLGEWAMLPEPKLIEALAALGETTEPDLPAARRLFARAIETPGGLRVQTIH
SFCAGVLRRFPLEAGVPHGFSELDDRTAALIRSEIIEEMAQDNAPELQDLLALHSGDRID
GFLAGLKGFDAHPDEAEVWIMADLPPGYSWADLRSDVFPGGRADVITNIIPALSGSGAND
SKAAAKLAAGDWAQPGMAEVALLEGVLLTGSGAKEPFTAKIGSFPTKGLQSGACAPFMDD
LNNLMARVEGARAKRLALAHAEKTLALQRFGHAFSQKYEAAKRASGWLDFDDLIGKTAAL
LSESSMAQWVLFRLDGGIDHILVDEAQDTSPEQWQVIQRLTDEFTSGEGARPDDVRTLFV
VGDPKQSIYSFQGADIAVFEERRQGFAEAFAAVERPMQVLELRHSFRSSTAILSVVDAVF
AGEAARGLGDPPRHIAFRTALPGRVDLWPAIPKPEVPEVGDWTDPVDQAVENSEISELAR
AIAEGIADILGQPIYDAKNNKIRRARAGDILILVQRRSDLFGEIIGALKAARLPVAGADR
LKLAAELAVMDIQSVLSVVATPEDDLALAEALRSPLFGLSEDELYRLSSGREGKAYLWQR
LRESERHRGAFEVLFDLMGQTGFMRPYDLISRLLIRHNGREKLISRLGVEAEDGIDELLS
QALIYEMSEVPSLTGFLVWLEGDDVEVKRQAGSASEEGEGLIRVMTVHGSKGLEAPIVIL
PDAAKRRPPQEAAVMRMPGAAPVWRGRKDERPAQIAELAAAQTERQMLERKRLLYVGLTR
AESWLIVAAAGETGAGEDSWHAQVAAGLSRVEGLHRCTLPGPTGGEILRFSHGDWPEDAP
QTEDRPIHEIAEPDWLRRPAKLYPRPARPVAATGLGGAKVIGKPTDYEGDAEAAMLAGTR
LHLLLEHLPDLDPEDWPQVARDVLADAEGGLPDDATLADLLAEAAEVISAPDLGAVFDLP
AGAEVLREVALVGELPGLGVISGAIDRLIVLPDRVLAVDFKSNREIPDRPEATPLGILRQ
LAAYRTALAQIYPGRAVEAAVLWTRARRMDVIAEALLDEALVGLDPSLFAT
NT seq
3396 nt
NT seq
+upstream
nt +downstream
nt
atgatggatgaggcgacgctggcgcaggtccgggccgccgatccggggcgctcgacctgg
ctgacggcgaatgcgggctcgggcaagacgcgggtgctgaccgaccgggtggcgcggctt
ttgctggccgggaccgcgccggagcgcattctctgcctgacctataccaaggccgccgcg
accgagatgcagaaccgtctgctcaagcgtctcggcgaatgggcgatgctgcccgagccc
aagctgatcgaggctttggccgctttgggcgagacgaccgaacccgacctgcccgccgcg
cgccgtctgtttgcccgcgcgatcgagacgccgggcgggctgcgcgtgcagacgatccac
agcttctgcgcgggtgttttgcggcgttttccgttggaagcgggcgtgccgcatggcttt
tccgaactcgacgaccgcaccgccgcgctgatccgctcggaaatcatcgaagagatggcg
caggacaacgcgcccgaattgcaggatctgctcgcgctgcattccggcgaccgcattgac
ggatttctggccggtctcaagggctttgacgcgcaccccgacgaggccgaggtctggatc
atggcggatttgccgcccggctattcctgggccgatctgcgcagcgatgtctttccgggc
gggcgcgcagatgtgatcacaaatatcatcccggcgctttcgggcagcggggccaatgac
agcaaggcagcggcaaagctggcagcgggcgattgggcccagcccggcatggccgaggtc
gcgctgctggaaggcgtgcttttgaccggctcgggcgcgaaagagcccttcaccgccaag
atcggctctttcccgaccaaggggctgcaaagcggtgcctgcgcgcccttcatggacgat
ctgaacaatctgatggcgcgggtcgagggcgcgcgcgccaagcggctcgccttggcccat
gccgaaaagacgctggctttgcagcggttcggtcatgcgttttcgcagaaatacgaggcg
gccaaacgcgcgtcgggttggctcgattttgacgatctcatcggtaagacggcggcgctg
ttgtcggaaagctcgatggcgcaatgggtgctcttccggctggatggcggcatcgaccat
atccttgtcgacgaggcgcaggacaccagccccgagcaatggcaggtgatccagcggctg
accgacgaattcacctcgggcgagggcgcgcggcccgatgacgtgcgcacgcttttcgtc
gtgggcgatccgaaacaatcgatctattcgttccagggcgccgatatcgcggtgttcgaa
gaacgccgtcagggctttgccgaggcttttgccgccgtcgagcgcccgatgcaggtgctg
gaactgcgtcattccttccgctcgtcgaccgcgatcctctcggtggtggatgcggttttc
gcgggcgaggccgcgcgcggcttgggcgatccaccccggcatatcgcattccgcaccgct
ctgcccgggcgcgtcgatctgtggcccgcgatcccgaagcccgaagtgcccgaggttggg
gactggaccgatccggttgatcaggcggttgagaattccgagatctcggagctggcccgc
gcgattgccgaaggcatcgctgacattctgggacagccgatttatgacgcaaagaacaac
aagatacggcgtgctcgcgcaggtgatatactaattcttgttcaaagacgctcagatttg
tttggcgagatcataggggcactaaaagccgcgcgtctgccggtggccggggcggatcgg
ctcaagctcgcggcagaacttgcggtgatggacatccaatccgtgctctcggtcgtggcg
acgcccgaagacgatctggccttggccgaagccctgcgctcgccgctgtttgggctgagc
gaggatgagctttaccgtctctcctccggacgcgagggcaaggcttatctctggcaaagg
ttgcgcgaatccgaacgtcatcgcggcgcgttcgaggtgctgttcgatctgatgggccag
accggcttcatgcggccctatgatctgatttcgcggcttctgatccgccacaacgggcgc
gaaaagctgatttctcggctgggtgtcgaggccgaggacgggatcgacgagctgctgtcg
caggcgctgatctatgaaatgtcggaagtgccctcgctcaccggatttctggtctggctc
gagggcgatgatgtcgaggtcaaacgtcaggcgggctcggccagcgaagagggcgagggg
ctgatccgggtgatgacggtgcatggctcgaaagggcttgaagcgccgatcgtcattctg
cccgacgccgccaagcgccgcccgccgcaagaggcggcggtgatgcggatgccgggcgcg
gcgccggtctggcgcgggcgcaaggatgaacgccccgcccagatcgccgagctggccgcc
gcccaaaccgagcgccaaatgctcgaacgcaagcggctgctctatgtcgggctgacgcgc
gcggaaagctggctgatcgtggcggcggcgggtgaaaccggcgcgggcgaggacagctgg
cacgcgcaggtggccgcggggctgtcgcgggtcgagggcctgcaccgctgcaccctgccc
ggcccgaccggcggcgagatcctgcgcttttcccacggcgattggcccgaagacgcgccg
cagaccgaagatcgccccatacatgagatcgccgagccggactggctgcgccgtcccgcg
aagctctatccccgcccggcgcgtccggttgcagcgacggggctgggcggcgccaaggtg
atcggcaagcccaccgattacgaaggcgatgccgaggcggcgatgttggccggtacgcgg
cttcacctgctgctggaacatctgcccgatctcgatcccgaagactggccgcaggtcgcg
cgcgatgttctggccgatgccgagggcgggctgcctgatgatgccacgctggccgatctg
ctggccgaggccgccgaggtgatctcggcccccgatctcggcgcggtcttcgatctgccc
gccggggccgaggttctgcgcgaggtggctctggtcggcgagttgccgggtttgggcgtg
atcagcggcgcgatcgaccggctgatcgtgctgcccgaccgcgtgttggcggtcgatttc
aaatcgaaccgcgagatccccgaccggcccgaagcaactccgcttggcattttgcgccag
cttgcggcctatcgcacggcgctggcgcagatctatccggggcgtgcggtcgaggcggcg
gttttgtggacaagggcgcgccgaatggatgtgatcgccgaggcgctgcttgatgaagcg
ctggtcggacttgacccgagcctgttcgccacctag
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