Paracoccus aminophilus: JCM7686_3440
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Entry
JCM7686_3440 CDS
T02792
Name
(GenBank) helicase/exonuclease, AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
pami
Paracoccus aminophilus
Brite
KEGG Orthology (KO) [BR:
pami00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pami03400
]
JCM7686_3440
Enzymes [BR:
pami01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
JCM7686_3440
DNA repair and recombination proteins [BR:
pami03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
JCM7686_3440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
AGT10475
UniProt:
S5Y417
LinkDB
All DBs
Position
complement(3570037..3572976)
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AA seq
979 aa
AA seq
DB search
MAEWQPGVFALPCGVDFAGALADGLIERMAGRPPEAMARVTVYLNSGRTLTELREAFLTR
GPRFLPQMRLVTQLGGGAATARLARRLELGQTIDRFVKLQPDLARGQSVPELAASLADLM
AEMQLEGLTVEDLTKIDASDHAQHWARSLEFLKIAANFYMAEPAQDSEARLRQAGEAMAR
DWAEGRNLPADPVVVAGSTGSHGATRDFMMAVARLDKGAVVLPGYDPWQSSSVWKTLDAR
AEDHPQARHAPFIAEFGEPQPWTLSHQAPDPARNRLMSLALRPAPVTDQWIAEGPGLGDL
IPATEGLTLIEAEQPGEEAEAIALIMREAAEEGRELTLLSPDRGLLRRVTSALDRWSIIP
DDSSGRPLALTSPGLFLRHVAALFGQPLTVDALLVILKHPLSHSGAGRETRREHQRLTRD
LELELRRHGPAFPDAEFMRRWGSKRDETRRDWAEWLAQTMERLAPLAEDRRPRPLTQRLA
DLEALANELAAGPGGAPEASELWKERPGEAAKALLGHLNTHAHLGHDMRPGEFADFLMRE
MNLQSVRLDAITNHLIHFRGPREARTEKSPLLILAGLNEGSWPQALDPDPWLSRPMRLAA
GLTLPERRIGLSAHDFQQAVAAPRVILTRARRDAEAETIPSRWLNRLVNLLGGLPAQNGK
EALAAMRQRGQLWLDLAELQGRPRLKIAPAERPSPIPPFPALSQMSVTEVKTLIRDPYAV
YARRVLGLNRLPPLRAEPDPAERGTVLHGIVQGFLLARGADTSPEALKAVLLRKADEVLE
AKVPWPSARLFWRARIARIADQLVRDESERLASGSLPLVVESRGKAMLPDFDFALTAQPD
RIDVLPDGRAQIYDYKSGKPPTDKQIAHFDKQLPLEAAMAERGAFEKLGQTEVAGISYIQ
LGGEGRTESRDFPFGFADRTWSGFAELIGKYLRGERGFTARLAMEQSVHGSDYDHLSRMG
EWAPTEAASPMKIGDHNDG
NT seq
2940 nt
NT seq
+upstream
nt +downstream
nt
atggctgagtggcagccgggcgtctttgccctgccctgtggcgtcgatttcgccggagcc
ctcgccgatgggctgatcgagcgcatggcgggtcgcccgcccgaggcgatggcgcgggtg
acggtctatctcaactcgggccgcacgctgaccgaattgcgcgaggctttcctgacccga
ggcccgcgctttctgccgcagatgcggctggtcacccagcttggcggcggcgcggcgacc
gcgcggctggcgcggcggcttgagctcggccagaccatcgaccggttcgtcaagctccag
cccgatctcgcgcgcggccagtcggtgccggaactcgcagcctcgctggccgatctcatg
gcggaaatgcagcttgaggggctgacggtcgaggatctgaccaagatcgacgcttcggac
catgcccagcattgggcgcgctcgctcgaatttctgaagatcgccgccaatttctacatg
gccgagcccgcgcaggacagcgaagcccggctgcgtcaggccggagaggcgatggcgcgc
gactgggctgagggccggaacctgcccgccgatccggtcgtggtcgcgggctcgaccggc
tcgcatggcgcgacgcgggatttcatgatggcggtcgcgcgattggacaagggcgcggtg
gtgctgccgggctatgacccgtggcaatcctcctcggtctggaagacgctcgacgcccgg
gccgaggatcacccgcaggcccgtcacgccccgttcatcgccgaattcggcgagccgcag
ccttggacgctcagccatcaggcgccggacccggcgcgcaaccggctgatgtcgctggcc
ttgcgccctgccccggtcaccgatcaatggatcgccgaaggcccgggtctcggcgatctc
atccccgcgaccgagggcctgacccttatcgaagccgagcagcccggcgaagaggccgag
gcgattgcgctgatcatgcgcgaagccgctgaagagggccgcgagttgacgcttttgtcc
cccgatcgcgggctcttgcggcgtgtgacctcggcgctggatcgttggagcatcattccc
gatgacagctcgggccgcccgctggcgctgacctcgccggggctcttcttgcgccatgtt
gctgcgcttttcggccagccgctgaccgtcgatgccctgctggtgatcctgaaacatccg
ctctcgcattccggcgcgggccgcgagacccggcgcgagcatcagcgcctgacccgcgat
ctcgagctcgagttgcgccgccacggccccgccttcccggatgccgaattcatgcgccgc
tggggctcgaaacgtgacgaaacccggcgcgactgggccgaatggctcgcccagacgatg
gagcggctcgcccctctggccgaggatcgccgcccgcgcccgctgacccagcggcttgcc
gatctggaggctttggccaatgagctggcggcgggtccgggcggcgcgcccgaggcctcc
gagctctggaaagagcgtcccggcgaggcggccaaggcgctcctgggccatctcaacacc
catgcccatctcggccatgacatgcgccccggtgagttcgccgatttcctgatgcgcgag
atgaacctgcaaagcgtccgcctcgacgcgatcaccaaccatctgatccatttccgcggc
ccgcgcgaggcaaggaccgagaaatcgccgctcctgatcttggccgggctgaatgagggc
agctggccgcaggcgctcgaccccgatccgtggctgtcgcggccgatgcggcttgcggcg
gggctgactttgccggaacgccggatcgggctttcggcgcatgacttccagcaggccgtc
gccgcgccccgcgtgatcttgacgcgcgcccgccgcgatgccgaggccgagacgatcccc
tcgcgctggctgaaccgtctggtgaacctcttgggcggcctgcctgcgcaaaacggcaaa
gaggcgcttgcggcgatgcgccaacgcggccagctctggctcgatctcgccgagctgcag
ggccgcccgcgcctgaagatcgcgcccgccgagcgcccctcgccgatcccacccttcccg
gcgctcagccagatgtcggtgaccgaggtcaagaccctgatccgcgacccctatgcggtc
tatgcgcgccgcgtattgggcctgaaccgcctgcccccgctgcgcgccgagcccgatccg
gccgagcgcggcacggtgctgcacggcatcgtgcagggctttttgctggcgcgtggcgcg
gacaccagccccgaagcattgaaagcggtgctgctcaggaaagccgatgaggtgcttgaa
gccaaggtgccctggccctcggcgcggctgttctggcgggcgcggattgcgcggatcgcc
gatcagctggtgcgcgacgaatccgagcggctcgcctcgggtagtctgcccttggtggtc
gaaagccggggcaaagcgatgctgcccgatttcgatttcgcgctgactgcgcagcccgac
cgcatcgacgttctgcccgatgggcgggcgcagatctatgactacaaatccggcaaaccg
ccgaccgacaagcagatcgcccatttcgataagcagctgccactcgaagccgcgatggcc
gagcgcggtgcctttgaaaagctgggccagaccgaggtcgcgggcatcagctatatccag
cttggcggcgagggccgcaccgaaagccgcgactttccctttggtttcgccgaccgaact
tggtctggtttcgccgagctgatcgggaaatatctgcgcggcgagcgtggctttaccgcc
cggcttgcgatggaacaatcggtccacggcagcgattatgaccatctgtcgcgcatgggc
gaatgggctccgaccgaggcggcgagcccgatgaaaattggtgatcacaatgatggatga
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