Paracoccus aminophilus: JCM7686_pAMI5p249
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Entry
JCM7686_pAMI5p249 CDS
T02792
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
pami
Paracoccus aminophilus
Pathway
pami00260
Glycine, serine and threonine metabolism
pami00460
Cyanoamino acid metabolism
pami00630
Glyoxylate and dicarboxylate metabolism
pami00670
One carbon pool by folate
pami00680
Methane metabolism
pami01100
Metabolic pathways
pami01110
Biosynthesis of secondary metabolites
pami01120
Microbial metabolism in diverse environments
pami01200
Carbon metabolism
pami01230
Biosynthesis of amino acids
pami01240
Biosynthesis of cofactors
pami04981
Folate transport and metabolism
Module
pami_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
pami00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
JCM7686_pAMI5p249
09102 Energy metabolism
00680 Methane metabolism
JCM7686_pAMI5p249
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
JCM7686_pAMI5p249
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
JCM7686_pAMI5p249
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
JCM7686_pAMI5p249
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
JCM7686_pAMI5p249
Enzymes [BR:
pami01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
JCM7686_pAMI5p249
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
NUC153
Motif
Other DBs
NCBI-ProteinID:
AGT11315
UniProt:
S5Y6V9
LinkDB
All DBs
Position
pAMI5:complement(274369..275646)
Genome browser
AA seq
425 aa
AA seq
DB search
MNDLTKSFFNASVQETDPLIAEALANERKRQMNQIELIASENIVSQAVLDALGHEMTNKT
LEGYPGNRFHGGGQFVDVVEQAAIDRAKELFNCGYANVQPHSGTQANLAVFFLLVKPGDK
ILSLDLAAGGHLSHGMKGNLSGRWFESHNYNVDPQNEVINYDEMERIAEEVQPKLIITGG
SAYPRELDFARMSQIAKKVGAYFMVDMAHIAGLVAGGVHPSPFPHADIVTCTTTKTLRGP
RGGLILTNNEDWFKKLQTAVFPGVQGSLHSQVLAAKAICLGEALRPEFKAYAAQVVKNAK
VLAETLASRGVRIVSGGTDTHIVLLDLSSKGLNGKQAEDALARANITSNKNPIPNDSPRP
AEWVGMRLGVAAATTRGMTEDDFRTLGNIVADLLEAETAGKGEEAAAVARVTVQELTERF
PVYAH
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgaatgatctgaccaagtcattcttcaacgcatcggttcaagagaccgatccgctgatc
gccgaagcccttgccaatgagcgcaaacggcagatgaaccagatcgagctcatcgcctcg
gaaaacatcgtgagccaagcggttctggatgcgctcgggcacgagatgaccaacaagacg
ctcgaaggctatccgggcaaccgcttccatggcggtggtcagttcgtcgacgtggtcgag
caagcggccattgatcgcgcgaaagagctcttcaactgcggctacgccaacgttcagccg
cattccggcacgcaggcgaaccttgcagtcttcttcctgctcgtgaagcccggcgacaag
atcctgtcgctcgatctggcagccggtggccacctctcgcatgggatgaagggcaacctg
tcgggccgttggttcgaatcgcacaactacaacgtcgatccgcaaaatgaagtcatcaac
tatgacgagatggagcgcatcgccgaagaagtgcagccgaagctgatcatcaccggcggc
tcggcctatccgcgtgaactcgacttcgcgcgcatgtcccagatcgcgaagaaggtcggc
gcctatttcatggtcgacatggcccatatcgcgggtctcgtcgccggtggcgtgcatccc
tcgcccttcccgcatgccgatatcgtgacctgcaccaccacgaaaaccctgcgcggcccg
cgcggcggcctgatcctcaccaacaacgaggattggttcaagaagctccagaccgccgtt
ttcccgggcgttcagggctcgctgcattcgcaagtgcttgcggccaaagcgatctgcctt
ggcgaagcgctgcgccccgagttcaaggcctatgccgctcaggtcgtgaagaacgccaag
gttctggccgagacgctcgcctcgcgtggggttcgcatcgtgtcgggcggcactgacacc
catatcgtcctgctcgatctgtcgagcaaagggctgaacggcaaacaggccgaggatgct
ctggcccgcgccaacatcacctcgaacaagaacccgatcccgaacgacagcccgcgtccg
gcggaatgggtcgggatgcgccttggcgtcgccgcagccaccacgcgcggcatgaccgaa
gacgatttccgtaccctcggcaatatcgtcgccgatctgctcgaagctgaaaccgcaggc
aaaggcgaagaagccgccgccgtcgcgcgtgtgaccgtgcaagagctgaccgagcgtttc
ccggtctacgcgcactaa
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