Paracoccus aminovorans: JCM7685_0214
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Entry
JCM7685_0214 CDS
T05468
Symbol
rho
Name
(GenBank) Transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
pamn
Paracoccus aminovorans
Pathway
pamn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pamn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JCM7685_0214 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pamn03021
]
JCM7685_0214 (rho)
03019 Messenger RNA biogenesis [BR:
pamn03019
]
JCM7685_0214 (rho)
Transcription machinery [BR:
pamn03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
JCM7685_0214 (rho)
Messenger RNA biogenesis [BR:
pamn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
JCM7685_0214 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
S1CSD-TOTE-2
NACHT
AAA_25
AAA_22
OB_RNB
AAA
Fungal_virus_P2_C
Spore_III_AA
Motif
Other DBs
NCBI-ProteinID:
CQR84800
LinkDB
All DBs
Position
I:complement(209730..211001)
Genome browser
AA seq
423 aa
AA seq
DB search
MTEERLNLSDLKAKSPADLLSMAEEWEIENASTMRKGEMMFSLLKEHAEDGWDIGGDGVL
EVVQDGFGFLRSTEANYLPGPDDIYVSPEMIRQHSLRTGDTVEGVIRAPGENERYFALTK
VERINFEHPEKARHKVAFDNLTPLYPNDRLKMEIEDPTIKDRSARIIDLVAPIGKGQRSL
IVAPPRTGKTVLLQNIAHSIANNHPECYLIVLLIDERPEEVTDMQRSVKGEVVSSTFDEP
ASRHVAVSEMVIEKAKRLVEHKRDVVILLDSITRLGRAFNTVVPSSGKVLTGGVDANALQ
RPKRFFGAARNIEEGGSLTIIATALIDTGSRMDEVIFEEFKGTGNSEIVLDRKVADKRVF
PAMDILKSGTRKEELLVDAKDLQKTYLLRRILNPMGTTDAIEFLISKLKQTKTNGEFFDS
MNA
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaagaacgtcttaacctgtccgatctcaaggccaagagtccggccgacctgctg
tccatggccgaggaatgggagatcgagaacgcctcgaccatgcgcaagggcgagatgatg
ttctcgctgctcaaggaacatgccgaggacggttgggacatcggcggcgacggcgtgctc
gaggtggtgcaggacggtttcggtttcctgcgctcgaccgaggcgaactacctgcccggc
ccggacgacatctatgtcagccccgagatgatccggcagcacagcctgcgcaccggcgat
accgtcgaaggcgtgattcgcgccccgggcgagaacgagcgctatttcgccctgaccaag
gtcgagcggatcaatttcgagcatcccgagaaggcgcgccacaaggttgccttcgacaac
ctgacgccgctttatccgaacgatcggctgaaaatggagatcgaggacccgacgatcaag
gaccgctcggcccggatcatcgatctggtcgcgcccatcggcaagggccagcgttcgctg
atcgtggcaccgccgcgcaccggcaagaccgtgctgctgcagaacattgcccattctatc
gccaacaaccatcctgaatgctacctgatcgtgctgctgatcgacgagcgaccggaagag
gtgacggacatgcagcgctcggtcaagggagaggtggtatcgtcaacctttgatgaaccg
gccagccggcatgtcgccgtttcggaaatggtcatcgaaaaggcaaaacgtttggtcgaa
cacaaacgagatgttgtgattctgttagattcgataacaaggcttggtagggcattcaat
actgtggtgccgagctcgggcaaggtcctgaccggcggtgtggacgcgaacgcgttgcag
cgtccgaaacgcttcttcggcgccgcccggaatatcgaggaaggcggctcgctgaccatt
atcgccacggccctgatcgacaccggctcgcgcatggatgaagtgattttcgaggaattc
aagggtaccggcaacagcgagatcgtcctggatcgcaaagtggcggacaagcgggtcttc
ccggcgatggacatcctgaaatccggtacccgcaaggaagagctgctggtcgatgccaag
gatctgcaaaagacctatctgctgcggcgcatcctgaacccgatgggcaccacggacgcg
atcgaattcctgatctcgaagctgaagcagaccaagaccaacggcgaattcttcgattcg
atgaacgcctga
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