Paracoccus aminovorans: JCM7685_0369
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Entry
JCM7685_0369 CDS
T05468
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pamn
Paracoccus aminovorans
Brite
KEGG Orthology (KO) [BR:
pamn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pamn03016
]
JCM7685_0369 (truB)
Enzymes [BR:
pamn01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
JCM7685_0369 (truB)
Transfer RNA biogenesis [BR:
pamn03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
JCM7685_0369 (truB)
Prokaryotic type
JCM7685_0369 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
CQR84953
LinkDB
All DBs
Position
I:366265..367158
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AA seq
297 aa
AA seq
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MARKKGREIHGWLIVDKPAGVGSTDVVGKVRWALDAKKAGHAGTLDPDATGVLAIALGEA
TKTVPILTEALKAYDFTVNWGAETASDDASGAVLKTSDIRPDEAAIRAALPRFTGEIMQV
PPAVSAVKVEGERAYDLAREGETVELAARPLWVESLELLGTTPDTADLRMVCGKGGYVRA
IARDLGRTLGCLGHVARLRRIWSGPFDAEQGIAFDRIDRANQAEIEAALLPLQAALADLP
QMQATEMGATRILNGNPGQVLGHAEFGEEVWVARQGRALCIGRYMGGEVQPSRVFNL
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atggcacggaaaaaagggcgtgagatccacggttggctgatcgtggacaagcccgcgggc
gtgggctcgactgacgtggtgggcaaggtccgctgggcgctggacgcgaagaaggccggc
cacgccggcacgctggacccggatgcgaccggggtgctggccatcgcgctgggtgaggcg
accaagaccgtgccgatcctgaccgaggcgctgaaggcctatgacttcaccgtcaactgg
ggcgccgagaccgccagcgacgacgcttcgggtgcggtgctgaaaaccagcgacatccgc
ccggacgaagccgcgattcgcgccgccctgccgcgctttaccggagagatcatgcaggtc
ccgcccgccgtctcggccgtcaaggtcgagggcgagcgcgcctatgaccttgcgcgcgaa
ggcgagacggtcgagctcgccgcccgcccgctttgggtggaatcgctggaactgctgggc
accacgcccgacaccgccgacctgcgcatggtctgcggcaagggcggctatgtccgcgcc
atcgcccgcgacctgggccggaccctgggctgccttggccatgtcgcgcgcctgcgccgg
atctggtcgggccccttcgacgccgagcagggcattgccttcgaccgcatcgaccgcgcc
aaccaggccgagatcgaggccgcgctgctgcccctgcaagccgcgctggccgacctgccg
cagatgcaagcgaccgagatgggcgccacccgcatcctgaacggcaaccccggccaggtt
ctgggccatgccgagttcggcgaggaagtctgggtcgcccgtcagggccgcgcactctgc
atcggccgctacatgggcggcgaggtccagccgagccgggttttcaacctctga
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