Paracoccus aminovorans: JCM7685_0654
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Entry
JCM7685_0654 CDS
T05468
Name
(GenBank) excinuclease ABC, subunit C
KO
K03703
excinuclease ABC subunit C
Organism
pamn
Paracoccus aminovorans
Pathway
pamn03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pamn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
JCM7685_0654
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pamn03400
]
JCM7685_0654
DNA repair and recombination proteins [BR:
pamn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
JCM7685_0654
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UvrC_RNaseH_dom
GIY-YIG
HHH_5
UVR
HHH_2
HHH
GIY_YIG_2
GIY_YIG_domain
HHH_3
Motif
Other DBs
NCBI-ProteinID:
CQR85236
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Position
I:complement(648079..649950)
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AA seq
623 aa
AA seq
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MTDSTPEKRPEKTGQALIQDYLKTLDGSPGVYRMLDQQGAVLYVGKARNLRARVSSYARG
TGHSARIARMIRETCSMMFLTTRTETEALLLEQNLIKQLKPRYNVLLRDDKSFPNILVAK
AHPFAQIKKHRGAKSEKGDYYGPFASAGAVNRTLNQLQRVFLLRSCTDATFSSRTRPCLL
YQIKRCSAPCVGRIEPADYAALVLDAERFLQGKSTAVQANLAREMAEAAEAMEYERAAAL
RDRIKALTAVQSVQAINPRGVPEADVIALHMEGGQACVQVFFIRGNQSWGNRDFYPRLNG
VESADEVMQAFIAQFYDGKVPPRMVLLSHGIEDPDLMAEILTEKAGRKVVLGVPQRGEKA
ELVDNALRNARESLARRMSESAAQARLLEGLAEAFDLPAVPQRIEVYDNSHIQGTNAVGG
MVVAGPEGWIKSQYRKFNIKGTEITPGDDFGMMKEVLTRRFSRLLKEDPDRQTDAWPDLL
LIDGGAGQVSAVHQIMADMGVEDIPMVGVAKGLDRDHGKEEFHRFGQRPFALRMNDPVLY
FVQRLRDEAHRWAIGTHRAKRAKAVMANPLDEIAGVGASRKRALLQHFGSAKAVSRAGLA
DLVAVEGISESLAQKIVDHFQKG
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgaccgattccaccccagaaaagcggccggaaaagaccggccaggcactgatccaggac
tatctgaagacgctcgacggctcgccgggcgtctatcggatgctggaccagcagggggcg
gtgctctatgtcggcaaggcgcgcaacctgcgggcgcgggtgtccagctatgcgcgcggc
accgggcattcggcgcgcatcgcccggatgatccgcgaaacctgctcgatgatgttcctg
accacgcgcacggaaaccgaggcgttgcttctggagcagaacctcatcaagcagctgaag
ccgcgctacaacgtgctcttgcgcgacgacaagtccttcccgaacatcctggtcgccaag
gcgcatccctttgcccagatcaagaagcatcgcggcgccaagtcggaaaagggcgattat
tacggccccttcgccagcgccggggcggtgaaccggacgctgaaccagctgcagcgagtg
ttcctgctgcgcagttgcaccgatgcgaccttttccagccgcacccggccctgcctgctc
taccagatcaagcgctgctcggcgccctgcgtcggccgcatcgagccggcggattacgcc
gcgctggtgctggacgccgaacgcttcctgcaaggcaagtccaccgccgtgcaggcgaac
ctggcgcgcgagatggccgaggcggccgaagcgatggaatacgaacgcgccgccgcgctc
cgcgaccgcatcaaggcactgaccgcggtgcaatcggtgcaggcgatcaacccgcgcggc
gtgcccgaggccgacgtgatcgcgctgcatatggagggcggccaggcctgcgtgcaggtc
ttcttcatccgcggcaaccagagctggggcaaccgcgatttctatccccggctcaacggc
gtcgaatccgccgacgaggtgatgcaggccttcatcgcgcaattctacgacggcaaggtg
ccgccgcgcatggtcctgctgtcgcatggcatcgaggaccccgacctgatggccgagatc
ctgaccgagaaggccggccgcaaggtggtgctgggcgtgccccagcgcggcgaaaaggcc
gagctggtggacaacgccctgcgcaatgcgcgcgaaagcctggcccgccgcatgtccgaa
agcgcggcccaggcgcggctcttggaggggctggccgaggccttcgacctgcccgccgtg
ccgcagcgcatcgaggtctatgacaacagccatatccagggcaccaatgccgtcggcggc
atggtggtcgccggccccgagggctggatcaagagccagtatcgcaagttcaacatcaag
ggcaccgagatcacccccggcgacgatttcggcatgatgaaagaggtgctgacccggcgc
ttctcgcgcctgctgaaagaggaccccgaccgccagaccgacgcctggcccgacctcttg
ctgatcgacggcggcgccgggcaggtctcggcggtgcatcagatcatggcggacatgggg
gtcgaggacatccccatggtcggcgtcgccaagggcctcgaccgcgaccacggcaaggag
gaattccaccgcttcggccagcgcccctttgccctgcgcatgaacgatccggtgctgtat
ttcgtgcagcgcctgcgcgacgaggcgcatcgctgggccatcggcacgcatcgcgccaag
cgcgccaaggcggtgatggcgaatccgctggacgagatcgccggcgtcggcgccagccgc
aaacgcgcgctgctgcagcatttcggcagcgccaaggcggtcagccgcgccggcctcgcc
gacctggtcgcggtcgagggcatcagcgaatcgctggcgcagaagatcgtcgatcacttc
cagaagggttag
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