Paracoccus aminovorans: JCM7685_2023
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Entry
JCM7685_2023 CDS
T05468
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
pamn
Paracoccus aminovorans
Pathway
pamn00550
Peptidoglycan biosynthesis
pamn01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pamn00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
JCM7685_2023
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pamn01002
]
JCM7685_2023
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pamn01011
]
JCM7685_2023
Enzymes [BR:
pamn01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
JCM7685_2023
Peptidases and inhibitors [BR:
pamn01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
JCM7685_2023
Peptidoglycan biosynthesis and degradation proteins [BR:
pamn01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
JCM7685_2023
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
Beta-lactamase2
Peptidase_S13
Beta-lactamase
Motif
Other DBs
NCBI-ProteinID:
CQR86585
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All DBs
Position
I:2044776..2046515
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AA seq
579 aa
AA seq
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MKGPHNERALRGRKTGTVSRISKNVRLGLMILLAWAMPMAATAAPFAAFVMDARTGQEIY
AQNADTRLHPASLTKMMTLYLAFNAIERGQVRLDSKFLVSSHAASQPPSRLGLKPGQRIE
LRYLIRAAAVKSANDAATVIGEGLAGSEAQFGAQMTQMARALGMRNTNFRNANGLTTEGH
YSTARDMTILGRRLFYDFPQYYSIFSRRSADAGIATVSSTNRRFLDSYEGADGIKTGYTR
AAGFNLTASAKRGSKRIVATVLGGTSTAHRNTVMAQLLDAGFGKAPTRVREVKPAPPQLV
AEKKVRRTVQVASVAPSSPGSASSQVQLSASDRPVARASTAAVVTPAAISAAVSRAQAAA
APAPRAAGDTLAASARPNRKPGAGPVANAAVDPNVLARAARPAARPEEGDASEALAPAAG
DEIQAVRPTPAPRNDQSASLVEPAATGSASLFVQAAAAQPERMALLGTPAPAPRSETIIL
AALEPDHGAPEATEIVSRGSGSGKGWGVSLGLYRSQQEAEQLLLKTALQESASLGSAVSR
VANTKRGFEANFVGMSKETAELACGRMAARQQDCKVLGP
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgaagggtccgcataatgaacgggccctcagaggcagaaagaccgggaccgtgagcaga
atcagcaagaatgtccgcttgggactgatgatcctattggcctgggccatgcccatggcg
gcaacggcagcgcccttcgcggccttcgtcatggatgcccgaaccgggcaggaaatctat
gcgcagaacgccgacacgcggctgcaccccgcgtcgctgaccaagatgatgacgctttat
ctggccttcaacgccatcgagcgcggccaggtccggctggacagcaagttcctggtcagc
agccatgcggcctcgcaaccgccgtcgcggctggggctgaagcccggccagcggatcgag
ctgcgttacctgatccgcgccgcggcggtcaaatccgccaatgacgcggccaccgtgatc
ggagagggcctggcagggtccgaggcgcaattcggcgcgcagatgacgcagatggcgcgc
gcgcttggcatgcgcaacaccaatttccgcaacgccaacggcttgacgaccgaggggcat
tattccaccgcccgcgacatgacgatcctggggcggcggctgttctacgattttccgcaa
tattactcgatcttctcgcgccgttcggcggatgcgggcatcgccacggtgtccagcacc
aaccgccgcttcctcgacagctacgagggcgcggacgggatcaagaccggctatacccgc
gccgcgggcttcaacctgaccgcctcggccaagcgcggctcgaagcggatcgtggccacc
gtcctgggcggcacctcgaccgcgcatcgcaacacggtcatggcccagcttctggacgcc
ggtttcggaaaggcccccacccgtgtgcgtgaggtaaagcccgccccgccgcaactcgtg
gccgagaagaaggtgcgccgtacggtgcaggttgcaagcgtggcgccgtccagccccggt
tcggcctcgtcccaggtgcagctctcggcttcggatcggccggtggcgcgggcttcgacc
gcagcggtggtgacgccggcagccatctcggccgcggtatcgcgcgcccaggccgcggcc
gcgccagcccccagggccgccggtgatacgctggccgccagcgcgcgcccgaaccgcaag
cccggcgcaggcccggttgcgaatgccgccgtcgatcccaatgtcctggcccgcgccgcg
cgccccgccgcgcgtccggaagagggcgacgcctcggaagcgctcgcccccgcggccggg
gacgagatccaggcggtgcgcccgacgcccgctccgcgcaacgaccagtcggcaagcctg
gtcgaaccggctgccaccggctcggcttcgcttttcgtccaggcggcagcggcgcagcct
gaacggatggccctgctgggcacgcctgcgcccgctccgcgctcggaaacgatcatcttg
gccgcgctggaacccgaccacggcgcgcccgaggcgaccgagatcgtctcgcgcgggtcc
ggttcgggcaagggctggggggtttcgctgggcctctaccgctcgcagcaggaggccgag
caattgctgctgaagacggcgctgcaggaaagcgcctcgctgggcagcgccgtcagccgc
gtcgccaataccaagcgcgggttcgaggcgaatttcgtcggcatgtcgaaagagaccgcc
gagctggcctgcggccgcatggctgcgcgccaacaggactgcaaggtcctcggtccctga
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