Paracoccus aminovorans: JCM7685_2035
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Entry
JCM7685_2035 CDS
T05468
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
pamn
Paracoccus aminovorans
Pathway
pamn03030
DNA replication
pamn03410
Base excision repair
pamn03420
Nucleotide excision repair
pamn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pamn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JCM7685_2035 (polA)
03410 Base excision repair
JCM7685_2035 (polA)
03420 Nucleotide excision repair
JCM7685_2035 (polA)
03440 Homologous recombination
JCM7685_2035 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pamn03032
]
JCM7685_2035 (polA)
03400 DNA repair and recombination proteins [BR:
pamn03400
]
JCM7685_2035 (polA)
Enzymes [BR:
pamn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JCM7685_2035 (polA)
DNA replication proteins [BR:
pamn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
JCM7685_2035 (polA)
DNA repair and recombination proteins [BR:
pamn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
JCM7685_2035 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
JCM7685_2035 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
CQR86597
LinkDB
All DBs
Position
I:complement(2058507..2061311)
Genome browser
AA seq
934 aa
AA seq
DB search
MTDVFGKGHHLHLIDGSAFIFRAYHALPPLTRRSDGLPIGAVAGFCNMLWKYIQDGSGSD
QPTHAAVIFDHSSKTFRNDIYPLYKANRPEPPEDLRPQFPLTREATRAFNIACIETEGYE
ADDIIAALSCRARDAGGRVTIISSDKDLMQLVGGGVEMLDPIKGKPIGPDEVREKFGVGP
ERVVDVQALAGDSIDNVPGAPGIGIKTAAQLIGEYGDLETLLARAGEIRQPKRRQVLLDH
AEQIRISKRLVELDCDTPLDRTLESLSIREPEPQPLLEFLTRMEFRTLTNRVAERFGAEP
PAAPVPAAAERIAAAKAELPAIDRSLYVTIRDEAVLAEWLAEIVEKGQVAIDTETTGLDE
MQARLVGVSLCTGPGRAAYLPLGHVDGAADLFGSGAAVEGQLPLDRALALLKPVLEDPAV
LKIGQNIKYDWKMLARHDIRMAPVEDTMLLSYALNAGTHNHGMDELAQTYLGHRCLPIKD
LIGSGKAQIGFQQVAIDKAAEYAAEDAEVTWRLWHHFRPQLGQERVTTAYERLERPMVPV
LADMEMAGIRIDADHLRRMSSSFAQKMAALEAEIHALAGGPFNVGSPKQLGEILFERMGL
SGGKQGKTGAFSTGAEVLEDLAAEGHDLPARVLDWRALSKLKSTYTDALPLHVNAETRRV
HTCYSIAGAQTGRLASTDPNLQNIPVRTEEGRRIREAFIAAEGHRLVSLDYSQIELRILA
HVAAIPALKQAFRDGIDIHAMTASQMFGVPVEGMDPMIRRRAKAINFGVIYGISGFGLSR
NLRIPRAEAQAFIDTYFERFPEIRAYMDRTVAEAKQNGHVRTLFGRRINTPGINLSGPSA
GGARRAAINAPIQGAAADIIRRAMIRMPEAIAHLPAKMLLQVHDELVFEVEEAAVPALIE
VARGVMQGAADPAVRLDVPLIVDAGQGTSWAEAH
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atgacggacgtattcggcaagggccatcacctgcatctgatcgacggctcggccttcatc
tttcgcgcttatcacgcgctgccgccgctgacgcggcgctcggacgggttgcccatcggg
gcggtcgccggtttctgcaacatgctgtggaaatacatccaggacggctcgggttcggac
cagccgacccatgcggcggtgatcttcgaccacagttccaagacattccgcaacgacatc
tatccgctctacaaggcgaaccggcccgagccgcccgaggatctgcggccgcagtttccc
ctgacccgcgaggcgacgcgggcgttcaacatcgcctgcatcgagaccgagggctacgag
gccgacgacatcatcgcggcgctgtcctgccgggcgcgcgatgccggcgggcgcgtcacc
atcatcagcagcgacaaggacctgatgcagctggtcggcggcggcgtcgagatgctggac
ccgatcaagggcaagcccatcggtcccgacgaggtgcgcgagaagttcggcgtcggcccc
gaacgggtggtggacgtgcaggccctggccggcgattccatcgacaacgtgccgggcgcc
cctggaatcggcatcaagaccgccgcgcaactgattggcgaatatggcgatcttgaaacc
ctgctggcgcgcgcgggcgagatcaggcagcccaagcggcgccaggtcctgctggaccat
gccgagcagatccgcatctcgaagcggctggtcgagctggattgcgacacgccgctggat
cgcacgctggagagcctgtcgatccgcgagcccgagccgcagccgctgctggagttcctg
acgcggatggagttccgcaccctgaccaaccgcgtggccgagcgtttcggcgccgagccg
cccgccgcgccggtgccggcggcggccgagcggatcgcggccgccaaggcggaattgccg
gccatcgaccgcagcctttacgtcaccatccgcgacgaggcggtgctggccgaatggctg
gccgagatcgtcgagaagggtcaggtcgccatcgataccgagaccacagggctcgacgag
atgcaggcacggctggtcggggtctcgctctgcaccgggccggggcgggcggcctatctg
ccgctgggccatgtggacggcgccgcggacctgttcggttcgggcgccgcggtcgaggga
cagctgccgctggaccgggcgctggcgctgctcaagccggtgctcgaggatccggcggtg
ctgaagatcggccagaacatcaaatacgactggaagatgctggcccggcacgacatccgc
atggcgccggtcgaggacacgatgctgctgtcctatgcgctgaacgccggcacccacaac
cacggcatggacgagctggcgcagacctatctgggccaccgctgcctgccgatcaaggac
ctgatcggctcgggcaaggcgcagatcggcttccagcaggtcgccatcgacaaggccgcc
gaatatgcggccgaggatgccgaggtgacctggcggctgtggcatcacttccgcccgcag
ctggggcaggaacgggtgaccaccgcctatgagcggctggagcggccgatggtgccggtg
ctggccgatatggagatggccggcatccgcatcgacgccgaccacctgcgccgcatgtcg
agcagcttcgcccagaagatggcggcgctggaggccgaaatccacgcgctggcgggtggg
cccttcaacgtcggcagccccaagcagctgggcgagatcctgttcgagcgcatggggctg
tccggcggcaagcagggcaagaccggcgccttttccaccggggccgaggtgctggaggac
ctggccgccgagggccacgacctgccggcgcgggtgctggactggcgggcgctctcgaag
ctgaaatcgacctataccgatgcgctgcccctgcatgtgaacgccgagaccaggcgggtg
cacacctgctattccatcgccggggcgcagaccgggcggctggcctcgaccgatccgaac
ctgcagaacattccggtcaggaccgaggaagggcggcgcatccgcgaggccttcatcgcc
gccgagggccatcggctggtcagcctcgactacagccagatcgagctgcggatcctcgcc
catgtcgcggcgatcccggcgctgaagcaggccttccgcgacggcatcgacatccacgcc
atgaccgcgagccagatgttcggcgtgccggtcgagggcatggacccgatgatccgccgc
cgcgccaaggcgatcaatttcggggtgatctacggtatctcgggcttcggcctgtcgcgc
aacctgcgcattccgcgcgccgaggcgcaggccttcatcgacacctatttcgagcgcttt
cccgaaatccgcgcctatatggatcgcaccgtcgccgaggcgaagcagaacggccatgtg
cgcacgctgttcgggcgccgtatcaatacgccggggatcaacctcagcgggccctcggcc
ggcggcgcgcggcgcgcggcgatcaacgcgccgatccagggggcggcggcggacatcatc
cgccgcgccatgatccgcatgcccgaggccatcgcgcatctgccggcgaagatgctgctg
caggtgcatgacgaactggtcttcgaggtcgaggaggcggcggtcccagcgctgatcgag
gtcgcgcgcggcgtcatgcagggcgcggccgatcccgccgtgcgtctggacgtgccgctg
atcgtcgatgccgggcaggggaccagctgggccgaggcgcattga
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